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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACTTGCAATGGAGAAATTCCCAGAAAAGGTAGCAGTTGGTGTTTTCTTAACAGCTTTTGCTCCAGACACTGAACACCACCCATCTTATGTCTTGGAAAAGgtatgcttcttctactagctagtcttgaggttacttctgaaaattttcatcaaatttcatgattatacaatggtaaaattggcatttgctgctcaacaat...

Basic information

species Glycine max
transcript GLYMA16G26060.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192304668|gb|FG998740.1|FG998740
EST:     CAGCTTTTGCTCCAGACACTGAACACCACCCATCTTATGTCTTGGAAAAG                         TACAATGAGAGGACCCCGTTAGCTGCATGGTTAGACACTGAATTTGCTCCA
genomic: CAGCTTTTGCTCCAGACACTGAACACCACCCATCTTATGTCTTGGAAAAGgtatgcttct ... actccaatagTACAATGAGAGGACCCCGTTAGCTGCATGGTTAGACACTGAATTTGCTCCA
EST: gi|192316231|gb|FK011632.1|FK011632
EST:     CAGCTTTTGCTCCAGACACTGAACACCACCCATCTTATGTCTTGGAAAAG                         TACAATGAGAGGACCCCGTTAGCTGCATGGTTAGACACTGAATTTGCTCCA
genomic: CAGCTTTTGCTCCAGACACTGAACACCACCCATCTTATGTCTTGGAAAAGgtatgcttct ... actccaatagTACAATGAGAGGACCCCGTTAGCTGCATGGTTAGACACTGAATTTGCTCCA
EST: gi|37996785|gb|CF808374.1|CF808374
EST:     CAGCTTTTGCTCCAGACACTGAACACCACCCATCTTATGTCTTGGAAAAG                         TACAATGAGAGGACCCCGTTAGCTGCATGGTTAGACACTGAATTTGCTCCA
genomic: CAGCTTTTGCTCCAGACACTGAACACCACCCATCTTATGTCTTGGAAAAGgtatgcttct ... actccaatagTACAATGAGAGGACCCCGTTAGCTGCATGGTTAGACACTGAATTTGCTCCA
EST: gi|192294575|gb|FG986424.1|FG986424
EST:     CAGCTTTTGCTCCAGACACTGAACACCACCCATCTTATGTCTTGGAAAAG                         TACAATGAGAGGACCCCGTTAGCTGCATGGTTAGACACTGAATTTGCTCCA
genomic: CAGCTTTTGCTCCAGACACTGAACACCACCCATCTTATGTCTTGGAAAAGgtatgcttct ... actccaatagTACAATGAGAGGACCCCGTTAGCTGCATGGTTAGACACTGAATTTGCTCCA
EST: gi|151402824|gb|EV272637.1|EV272637
EST:     CAGCTTTTGCTCCAGACACTGAACACCACCCATCTTATGTCTTGGAAAAG                         TACAATGAGAGGACCCCGTTAGCTGCATGGTTAGACACTGAATCTGCTCCA
genomic: CAGCTTTTGCTCCAGACACTGAACACCACCCATCTTATGTCTTGGAAAAGgtatgcttct ... actccaatagTACAATGAGAGGACCCCGTTAGCTGCATGGTTAGACACTGAATTTGCTCCA
EST: gi|192328489|gb|FK023521.1|FK023521
EST:     CAGCTTTTGCTCCAGACACTGAACACCACCCATCTTATGTCTTGGAAAAG                         TACAATGAGAGGACCCCGTTAGCTGCATGGTTAGACACTGAATTTGCTCCA
genomic: CAGCTTTTGCTCCAGACACTGAACACCACCCATCTTATGTCTTGGAAAAGgtatgcttct ... actccaatagTACAATGAGAGGACCCCGTTAGCTGCATGGTTAGACACTGAATTTGCTCCA
EST: gi|192328359|gb|FK020070.1|FK020070
EST:     CAGCTTTTGCTCCAGACACTGAACACCACCCATCTTATGTCTTGGAAAAG                         TACAATGAGAGGACCCCGTTAGCTGCATGGTTAGACACTGAATTTGCTCCA
genomic: CAGCTTTTGCTCCAGACACTGAACACCACCCATCTTATGTCTTGGAAAAGgtatgcttct ... actccaatagTACAATGAGAGGACCCCGTTAGCTGCATGGTTAGACACTGAATTTGCTCCA