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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATCCGAGTTCGCTCCACAGGAACTCGTCCTTCGCTTGCTGCTCCGCCGAGACAACGCCGCATGTTCAGCACCTCGCAACCTCCACCTTCTCGATTGACCAgtacgtgtgttgtgtcttgtttaatgtttgctctttatgttttgttatttgaaattacgttttagtccctaattttgggacaggattggtttttagccac...

Basic information

species Glycine max
transcript GLYMA16G25560.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151409984|gb|EV279792.1|EV279792
EST:     ACAACGCCGCATGTTCAGCACCTCGCAACCTCCACCTTCTCGATTGACCA                         GACTAATTTTGGTGGCGAGAGGTTGAAGCTGTTTTCGGGGTCATGTTACCT
genomic: ACAACGCCGCATGTTCAGCACCTCGCAACCTCCACCTTCTCGATTGACCAgtacgtgtgt ... tgtttttcagGACTAATTTTGGTGGCGAGAGGTTGAAGCTGTTTTCGGGGTCATGTTACCT
EST: gi|51345245|gb|CO985978.1|CO985978
EST:     ACAACGCCGCATGTTCAGCACCTCGCAACCTCCACCTTCTCGATTGACCA                         GACTAATTTTGGTGGCGAGAGGTTGAAGCTGTTTTCGGGGTCATGTTACCT
genomic: ACAACGCCGCATGTTCAGCACCTCGCAACCTCCACCTTCTCGATTGACCAgtacgtgtgt ... tgtttttcagGACTAATTTTGGTGGCGAGAGGTTGAAGCTGTTTTCGGGGTCATGTTACCT