1 5' 3' |
CGACGGTTAAATCCGCCATGGATGCCGCTGCACCGACCATTGATGCTGCTGCGCAGAAGTCCGGGTCTTTTGCTTCATGGGCTTATGACAAAATTTCCCGgtaatctctctcactctcacatatgttaatctatgaagttctctcttgtcgtgttcaatgttcgacacgcatccgtattagtattcgacaccaacacaac...
species | Glycine max |
transcript | GLYMA16G25270.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCGCAGAAGTCCGGGTCTTTTGCTTCATGGGCTTATGACAAAATTTCCCG TGGCTTGGGGTTCGGAACGGAAGAACCAGTGGEST: gi|6914495|gb|AW396025.1|AW396025
genomic: GCGCAGAAGTCCGGGTCTTTTGCTTCATGGGCTTATGACAAAATTTCCCGgtaatctctc ... catgttatagTGGCTTGGGGTTCGGAACGGAAGAACCAGTGG
EST: GCGCAGAAGTCCGGGTCTTTTGCTTCATGGGCTTATGACAAAATTTCCCG TGGCTTGGGGTTCGGAACGGAAGAACCAGTGGCACAAACGAAGTATGAAGA
genomic: GCGCAGAAGTCCGGGTCTTTTGCTTCATGGGCTTATGACAAAATTTCCCGgtaatctctc ... catgttatagTGGCTTGGGGTTCGGAACGGAAGAACCAGTGGCACAAACGAAGTATGAAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGACGGTTAAATCCGCCATGGATGCCGCTGCACCGACCATTGATGCTGCTGCGCAGAAGTCCGGGTCTTTTGCTTCATGGGCTTATGACAAAATTTCCCGgtaatctctctcactctcacatatgttaatctatgaagttctctcttgtcgtgttcaatgttcgacacgcatccgtattagtattcgacaccaacacaac
- - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctctctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctctcac