1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GTGGTTCCGATTCAAACCACACGATTCCACGACCTTATTATGGAGCCGCGGTGGCGGTAGCGGTGGCCGGCGATTATAACGGCGGAGGAGTAAGAGATGGgtattactcctctttccttttacttttgcgctcgggtttctcggattttgctgtttctggatccgtattctcccaaagttctgaattttcgctgcgactg...
species | Glycine max |
transcript | GLYMA16G25210.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GTGGCGGTAGCGGTGGCCGGCGATTATAACGGCGGAGGAGTAAGAGATGG TTGTGTTGTGAGGAAGATTGGTAAGCTGTGGGAACATGTCGTTGAGAAGCAEST: gi|207740967|gb|GD714345.1|GD714345
genomic: GTGGCGGTAGCGGTGGCCGGCGATTATAACGGCGGAGGAGTAAGAGATGGgtattactcc ... attggtgcagTTGTGTTGTGAGGAAGATTGGTAAGCTGTGGGAACATGTCGTTGAGAAGCA
EST: ACGGCCGGGGGAGTAAGAGATGG CTGTGTTGTGAGGAAGATTGGTAAGCTGTGGGAACATGTCGTTGAGAAGCA
genomic: ACGG-CGGAGGAGTAAGAGATGGgtattactcc ... attggtgcagTTGTGTTGTGAGGAAGATTGGTAAGCTGTGGGAACATGTCGTTGAGAAGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGGTTCCGATTCAAACCACACGATTCCACGACCTTATTATGGAGCCGCGGTGGCGGTAGCGGTGGCCGGCGATTATAACGGCGGAGGAGTAAGAGATGGgtattactcctctttccttttacttttgcgctcgggtttctcggattttgctgtttctggatccgtattctcccaaagttctgaattttcgctgcgactg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctctttcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttctccc