1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
AATTGTTTCCTAATGGAATGCCCGTTCCTTTCGTGAACGAGATGTTTGTGTTGGCCAGAGACGGCGTCGAATTCGAGGTCGATAAGATTCCTGCCTCTGGgtcagttaccaattcttcttctttctataggattgattctgttcaatctttttatcgaaaaaaaaaggaaaaacgaacatttggggttattattcatacg...
species | Glycine max |
transcript | GLYMA16G18370.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TTGGCCAGAGACGGCGTCGAATTCGAGGTCGATAAGATTCCTGCCTCTGG AAATCATGGGGGTCATCTCAAAACAAAGGGAATCGTGTATTTGTCAAATATEST: gi|23735351|gb|BU765949.1|BU765949
genomic: TTGGCCAGAGACGGCGTCGAATTCGAGGTCGATAAGATTCCTGCCTCTGGgtcagttacc ... ttttgttcagAAATCATGGGGGTCATCTCAAAACAAAGGGAATCGTGTATTTGTCAAATAT
EST: TCGAGGTCGATAAGATTCCTGCCTCTGG AAATCATGGGGGTCATCTCAAAACAAAGGGAATCGTGTATTTGTCAAATATEST: gi|298187412|gb|HO034561.1|HO034561
genomic: TCGAGGTCGATAAGATTCCTGCCTCTGGgtcagttacc ... ttttgttcagAAATCATGGGGGTCATCTCAAAACAAAGGGAATCGTGTATTTGTCAAATAT
EST: TTGGCCAGAGACGGCGTCGAATTCGAGGTCGATAAGATTCCTGCCTCTGG AAATCATGGGGGTCATCTCAAAACAAAGGGAATCGTGTATTTGTCAAATATEST: gi|58019503|gb|CX706245.1|CX706245
genomic: TTGGCCAGAGACGGCGTCGAATTCGAGGTCGATAAGATTCCTGCCTCTGGgtcagttacc ... ttttgttcagAAATCATGGGGGTCATCTCAAAACAAAGGGAATCGTGTATTTGTCAAATAT
EST: -TGCCCAGAGACGGCGTCGAATTCGAGGTCGATAAGATTCCTGCCTCTGG AAATCATGGGGGTCATCTCAAAACAAAGGGAATCGTGTATTTGTCAAATATEST: gi|9204952|gb|BE331176.1|BE331176
genomic: TTGGCCAGAGACGGCGTCGAATTCGAGGTCGATAAGATTCCTGCCTCTGGgtcagttacc ... ttttgttcagAAATCATGGGGGTCATCTCAAAACAAAGGGAATCGTGTATTTGTCAAATAT
EST: TTGGCCAGAGACGGCGTCGAATTCGAGGTCGATAAGATTCCTGCCTCTGG AAATCATGGGGGTCATCTCAAAACAAAGGGAATCGTGTATTTGTCAAATATEST: gi|192304972|gb|FG997112.1|FG997112
genomic: TTGGCCAGAGACGGCGTCGAATTCGAGGTCGATAAGATTCCTGCCTCTGGgtcagttacc ... ttttgttcagAAATCATGGGGGTCATCTCAAAACAAAGGGAATCGTGTATTTGTCAAATAT
EST: TTGGCCAGAGACGGCGTCGAATTCGAGGTCGATAAGATTCCTGCCTCTGG AAATCATGGGGGTCATCTCAAAACAAAGGGAATCGTGTATTTGTCAAATATEST: gi|207762394|gb|GD731631.1|GD731631
genomic: TTGGCCAGAGACGGCGTCGAATTCGAGGTCGATAAGATTCCTGCCTCTGGgtcagttacc ... ttttgttcagAAATCATGGGGGTCATCTCAAAACAAAGGGAATCGTGTATTTGTCAAATAT
EST: CCTGCCTCTGG AAATCATGGGGGTCATCTCAAAACAAAGGGAATCGTGTATTTGTCAAATATEST: gi|26269004|gb|CA820067.1|CA820067
genomic: CCTGCCTCTGGgtcagttacc ... ttttgttcagAAATCATGGGGGTCATCTCAAAACAAAGGGAATCGTGTATTTGTCAAATAT
EST: TTGGCCAGAGACGGCGTCGAATTCGAGGTCGATAAGATTCCTGCCTCTGG AAATCATGGGGGTCATCTCAAAACAAAGGGAATCGTGTATTTGTCAAATAT
genomic: TTGGCCAGAGACGGCGTCGAATTCGAGGTCGATAAGATTCCTGCCTCTGGgtcagttacc ... ttttgttcagAAATCATGGGGGTCATCTCAAAACAAAGGGAATCGTGTATTTGTCAAATAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATTGTTTCCTAATGGAATGCCCGTTCCTTTCGTGAACGAGATGTTTGTGTTGGCCAGAGACGGCGTCGAATTCGAGGTCGATAAGATTCCTGCCTCTGGgtcagttaccaattcttcttctttctataggattgattctgttcaatctttttatcgaaaaaaaaaggaaaaacgaacatttggggttattattcatacg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaaaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggaaaaac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttggggt