1 5' 3' | 2 5' 3' | 3 5' 3' |
GGTCACCGCTACGCGTACAGTGCCGGTGACCGGTTGCCGGTGCACGTGGATTGGAGGGTGAAGGGTGCAGTTGCTCCAATCAAAGATCAGGGAAGTTGTGgtgagtattttttcctatcatttttccttttcttatggtaaagataatgtttgttatctaaggattttagatttagtaatcagttagggacttgttttaa...
species | Glycine max |
transcript | GLYMA16G16290.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TTGGAGGGTGAAGGGTGCAGTTGCTCCAATCAAAGATCAGGGAAGTTGTG GAAGTTGTTGGGCGTTCTCAACGGTGGCCACAGTGGAAGCAATAAACAAGAEST: gi|6481416|gb|AW200687.1|AW200687
genomic: TTGGAGGGTGAAGGGTGCAGTTGCTCCAATCAAAGATCAGGGAAGTTGTGgtgagtattt ... cttgatgcagGAAGTTGTTGGGCGTTCTCAACGGTGGCCACAGTGGAAGCAATAAACAAGA
EST: AGATCAGGGAAGTTGTG GAAGTTGTTGGGCGTTCTCAACGGTGGCCACANGTGGAAGCAATAAACAAGEST: gi|16348173|gb|BI973768.1|BI973768
genomic: AGATCAGGGAAGTTGTGgtgagtattt ... cttgatgcagGAAGTTGTTGGGCGTTCTCAACGGTGGCCACA-GTGGAAGCAATAAACAAG
EST: TTGGAGGGTGAAGGGTGCAGTTGCTCCCATCAAAGATCAGGGAAGTTGTG GAAGTTGTTGGGCGTTCTCAACGGTGGCCACAGTGGAAGCAATAAACAAGAEST: gi|151395182|gb|EV265053.1|EV265053
genomic: TTGGAGGGTGAAGGGTGCAGTTGCTCCAATCAAAGATCAGGGAAGTTGTGgtgagtattt ... cttgatgcagGAAGTTGTTGGGCGTTCTCAACGGTGGCCACAGTGGAAGCAATAAACAAGA
EST: TTGGAGAGTGAAGGGTGCAGTTGCTCCAATCAAAGATCAGGGAAGTTGTG GAAGTTGTTGGGCGTTCTCAACGGTGGCCACAGTGGAAGCAACAAACAAGAEST: gi|9203846|gb|BE330070.1|BE330070
genomic: TTGGAGGGTGAAGGGTGCAGTTGCTCCAATCAAAGATCAGGGAAGTTGTGgtgagtattt ... cttgatgcagGAAGTTGTTGGGCGTTCTCAACGGTGGCCACAGTGGAAGCAATAAACAAGA
EST: TGGAGGGTGAAGGGTGCAGTTGCTCCAATCAAAGATCAAGGAAGTTGGTG -AAGTTGTTGGGCGTTCTCAACGGTGGCCACAGTGGAAGCAATAAACAAGEST: gi|7691143|gb|AW759276.1|AW759276
genomic: TGGAGGGTGAAGGGTGCAGTTGCTCCAATCAAAGATCAGGGAAGTTG-TGgtgagtattt ... cttgatgcagGAAGTTGTTGGGCGTTCTCAACGGTGGCCACAGTGGAAGCAATAAACAAG
EST: TTGGAGGGTGAANGGTGCAGTTGCTCCAATCAAAGATCAAGGAAGTNGTG GAAGTTGTTGGGCGTTCTCAACGGTGGCCACAGTGGAAGCAATAAACAAGA
genomic: TTGGAGGGTGAAGGGTGCAGTTGCTCCAATCAAAGATCAGGGAAGTTGTGgtgagtattt ... cttgatgcagGAAGTTGTTGGGCGTTCTCAACGGTGGCCACAGTGGAAGCAATAAACAAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTCACCGCTACGCGTACAGTGCCGGTGACCGGTTGCCGGTGCACGTGGATTGGAGGGTGAAGGGTGCAGTTGCTCCAATCAAAGATCAGGGAAGTTGTGgtgagtattttttcctatcatttttccttttcttatggtaaagataatgtttgttatctaaggattttagatttagtaatcagttagggacttgttttaa
- - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA