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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATCATTGGCATCGTGGTTTCTTCTTTCTACGTCTTCTCTGCTATATACTCAGCCAACCCTCCTTCTGCTCAATCTTCTGCATGGCTCTCTTCCATTTCGAgtatgtgtttccgttaaaaatcgtgcctttttttgttcctcattagttttagcttcatttttaaatacccatttcaatcattgttgttattattgcttag...

Basic information

species Glycine max
transcript GLYMA16G08350.3
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213590935|gb|DB973732.1|DB973732
EST:     AGCCAACCCTCCTTCTGCTCAATCTTCTGCATGGCTCTCTTCCATTTCGA                         GTGATGCAACTCATGTTACGGATCAGACACTAAATGTTTCTCAGTCAGCAG
genomic: AGCCAACCCTCCTTCTGCTCAATCTTCTGCATGGCTCTCTTCCATTTCGAgtatgtgttt ... ggttttgcagGTGATGCAACTCATGTTACGGATCAGACACTAAATGTTTCTCAGTCAGCAG
EST: gi|213594699|gb|DB959810.1|DB959810
EST:     AGCCAACCCTCCTTCTGCTCAATCTTCTGCATGGCTCTCTTCCATTTCGA                         GTGATGCAACTCATGTTACGGATCAGACACTAAATGTTTCTCAGTCAGCAG
genomic: AGCCAACCCTCCTTCTGCTCAATCTTCTGCATGGCTCTCTTCCATTTCGAgtatgtgttt ... ggttttgcagGTGATGCAACTCATGTTACGGATCAGACACTAAATGTTTCTCAGTCAGCAG
EST: gi|209727652|gb|BW652025.1|BW652025
EST:     AGCCAACCCTCCTTCTGCTCAATCTTCTGCATGGCTCTCTTCCATTTCGA                         GTGATGCAACTCATGTTACGGATCAGACACTAAATGTTTCTCAGTCAGCAG
genomic: AGCCAACCCTCCTTCTGCTCAATCTTCTGCATGGCTCTCTTCCATTTCGAgtatgtgttt ... ggttttgcagGTGATGCAACTCATGTTACGGATCAGACACTAAATGTTTCTCAGTCAGCAG
EST: gi|209708017|gb|BW657072.1|BW657072
EST:     AGCCAACCCTCCTTCTGCTCAATCTTCTGCATGGCTCTCTTCCATTTCGA                         GTGATGCAACTCATGTTACGGATCAGACACTAAATGTTTCTCAGTCAGCAG
genomic: AGCCAACCCTCCTTCTGCTCAATCTTCTGCATGGCTCTCTTCCATTTCGAgtatgtgttt ... ggttttgcagGTGATGCAACTCATGTTACGGATCAGACACTAAATGTTTCTCAGTCAGCAG
EST: gi|213600369|gb|DB964365.1|DB964365
EST:     AGCCAACCCTCCTTCTGCTCAATCTTCTGCATGGCTCTCTTCCATTTCGA                         GTGATGCAACTCATGTTACGGATCAGACACTAAATGTTTCTCAGTCAGCAG
genomic: AGCCAACCCTCCTTCTGCTCAATCTTCTGCATGGCTCTCTTCCATTTCGAgtatgtgttt ... ggttttgcagGTGATGCAACTCATGTTACGGATCAGACACTAAATGTTTCTCAGTCAGCAG