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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTCGATGCTGGTAGCACGGGAAGCCGTGTACATGTCTATCGTTTTAACCAACAATTAGATCTCCTTCGCATTGGCCAAGACCTTGAGTTGTTTGTCAAGgtacttatcatgtttacaataactcttactttaaaattataagtttgacttagtggtaaacaaagaagggagaaaaaaacaagtcttttaagtttttcga...

Basic information

species Glycine max
transcript GLYMA16G04770.4
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|26057562|gb|CA800476.1|CA800476
EST:     AACAATTAGATCTCCTTCGCATTGGCCAAGACCTTGAGTTGTTTGTCAAG                         ACTATGCCAGGTTTAAGTGCTTACGCTGAGAATCCACAAGATGCTGCAGAA
genomic: AACAATTAGATCTCCTTCGCATTGGCCAAGACCTTGAGTTGTTTGTCAAGgtacttatca ... gtaattgcagACTATGCCAGGTTTAAGTGCTTACGCTGAGAATCCACAAGATGCTGCAGAA
EST: gi|9902312|gb|BE611280.1|BE611280
EST:     AACAATTAGATCTCCTTCGCATTGGCCAAGACCTTGAGTTGTTTGTCAAG                         ACTATGCCAGGTTTAAGTGCTTACGCTGAGAATCCACAAGATGCTGCAGAA
genomic: AACAATTAGATCTCCTTCGCATTGGCCAAGACCTTGAGTTGTTTGTCAAGgtacttatca ... gtaattgcagACTATGCCAGGTTTAAGTGCTTACGCTGAGAATCCACAAGATGCTGCAGAA
EST: gi|8827838|gb|BE211568.1|BE211568
EST:     AACAATTAGATCTCCTTCGCATTGGCCAAGACCTTGAGTTGTTTGTCAAG                         ACTATGCCAGGTTTAAGTGCTTACGCTGAGAATCCACAAGATGCTGCAGAA
genomic: AACAATTAGATCTCCTTCGCATTGGCCAAGACCTTGAGTTGTTTGTCAAGgtacttatca ... gtaattgcagACTATGCCAGGTTTAAGTGCTTACGCTGAGAATCCACAAGATGCTGCAGAA
EST: gi|7326536|gb|AW620334.1|AW620334
EST:     AACAATTAGATCTCCTTCGCATTGGCCAAGACCTTGAGTTGTTTGTCAAG                         ACTATGCCAGGTTTAAGTGCTTACGCTGAGAATCCACAAGATGCTGCAGAA
genomic: AACAATTAGATCTCCTTCGCATTGGCCAAGACCTTGAGTTGTTTGTCAAGgtacttatca ... gtaattgcagACTATGCCAGGTTTAAGTGCTTACGCTGAGAATCCACAAGATGCTGCAGAA
EST: gi|23732353|gb|BU764336.1|BU764336
EST:     AACAATTAGATCTCCTTCGCATTGGCCAAGACCTTGAGTTGTTTGTCAAG                         ACTATGCCAGGTTTAAGTGCTTACGCTGAGAATCCACAAGATGCTGCAGAA
genomic: AACAATTAGATCTCCTTCGCATTGGCCAAGACCTTGAGTTGTTTGTCAAGgtacttatca ... gtaattgcagACTATGCCAGGTTTAAGTGCTTACGCTGAGAATCCACAAGATGCTGCAGAA
EST: gi|151409575|gb|EV279383.1|EV279383
EST:     AACAATTAGACCTCCTTCGCATTGGCCAAGACCTTGAGTTGTTTGTCAAG                         ACTATGCCAGGTTTAAGTGCTTACGCTGAGAATCCACAAGATGCTGCAGAA
genomic: AACAATTAGATCTCCTTCGCATTGGCCAAGACCTTGAGTTGTTTGTCAAGgtacttatca ... gtaattgcagACTATGCCAGGTTTAAGTGCTTACGCTGAGAATCCACAAGATGCTGCAGAA
EST: gi|19934529|gb|BQ079559.1|BQ079559
EST:     AACAATTAGATCTCCTTCGCATTGGCCAAGACCTTGAGTTGTTTGTCAAG                         ACTATGCCAGGTTTAAGTGCTTACGCTGAGAATCCACAAGATGCTGCAGAA
genomic: AACAATTAGATCTCCTTCGCATTGGCCAAGACCTTGAGTTGTTTGTCAAGgtacttatca ... gtaattgcagACTATGCCAGGTTTAAGTGCTTACGCTGAGAATCCACAAGATGCTGCAGAA