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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAGCTGAAGCAAAAGCTCAATCCCTTGCGTTAATGGTGGATTGTCAGATTTGATTCGATTTTGGAAACAGCTTATCGATCCCTCAATCCGCTGTGAACAGgtagagtctcgtgatttgatagggaatttcgtaaagttttgttctttttatgaatggaaattctagttagttgtgtaagattcgtatagtgaattgggtttttggggatttgaattttgtagtatttaatggagtttgagttggatgcag

Basic information

species Glycine max
transcript GLYMA15G42460.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209709593|gb|BW661920.1|BW661920
EST:     TGATTCGATTTTGGAAACAGCTTATCGATCCCTCAATCCGCTGTGAACAG                         ATCGAGGGCGTGGTCTGTTTGATTTGAACTGAATTTCGGATTGAAGGATCT
genomic: TGATTCGATTTTGGAAACAGCTTATCGATCCCTCAATCCGCTGTGAACAGgtagagtctc ... ttggatgcagATCGAGGGCGTGGTCTGTTTGATTTGAACTGAATTTCGGATTGAAGGATCT
EST: gi|213616954|gb|DB959266.1|DB959266
EST:     TGATTCGATTTTGGAAACAGCTTATCGATCCCTCAATCCGCTGTGAACAG                         ATCGAGGGCGTGGTCTGTTTGATTTGAACTGAATTTCGGATTGAAGGATCT
genomic: TGATTCGATTTTGGAAACAGCTTATCGATCCCTCAATCCGCTGTGAACAGgtagagtctc ... ttggatgcagATCGAGGGCGTGGTCTGTTTGATTTGAACTGAATTTCGGATTGAAGGATCT
EST: gi|213587384|gb|DB965962.1|DB965962
EST:     TGATTCGATTTTGGAAACAGCTTATCGATCCCTCAATCCGCTGTGAACAG                         ATCGAGGGCGTGGTCTGTTTGATTTGAACTGAATTTCGGATTGAAGGATCT
genomic: TGATTCGATTTTGGAAACAGCTTATCGATCCCTCAATCCGCTGTGAACAGgtagagtctc ... ttggatgcagATCGAGGGCGTGGTCTGTTTGATTTGAACTGAATTTCGGATTGAAGGATCT
EST: gi|209710150|gb|BW658899.1|BW658899
EST:     TGATTCGATTTTGGAAACAGCTTATCGATCCCTCAATCCGCTGTGAACAG                         ATCGAGGGCGTGGTCTGTTTGATTTGAACTGAATTTCGGATTGAAGGATCT
genomic: TGATTCGATTTTGGAAACAGCTTATCGATCCCTCAATCCGCTGTGAACAGgtagagtctc ... ttggatgcagATCGAGGGCGTGGTCTGTTTGATTTGAACTGAATTTCGGATTGAAGGATCT