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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACTGCGAGCCACGAACCCAATCTCCGACGACGACGACCTCGGTCCAGGGACGACTTATCTCCGGAGACCCACAACTTTTCCGGCGACCAACCGTGCGCAGgttttttttctcgttttttcttgtttctttttttcttcgtcaactgtttttctttgctttttcttctcttctcaaatgttcttcatctggtattctgttt...

Basic information

species Glycine max
transcript GLYMA15G40590.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254316055|gb|GR825864.1|GR825864
EST:     CGACTTATCTCCGGAGACCCACAACTTTTCCGGCGACCAACCGTGCGCAG                         GTGCAAGGATAAGTGTGTGATCTATCTATAAACGCAAGATGTCAGCTGGGC
genomic: CGACTTATCTCCGGAGACCCACAACTTTTCCGGCGACCAACCGTGCGCAGgttttttttc ... gcttctacagGTGCAAGGATAAGTGTGTGATCTATCTATAAACGCAAGATGTCAGCTGGGC
EST: gi|308098199|gb|HO761370.1|HO761370
EST:     CGACTTATCTCCGGAGACCCACAACTTTTCCGGCGACCAACCGTGCGCAG                         GTGCAAGGATAAGTGTGTGATCTATCTATAAACGCAAGATGTCAGCTGGGC
genomic: CGACTTATCTCCGGAGACCCACAACTTTTCCGGCGACCAACCGTGCGCAGgttttttttc ... gcttctacagGTGCAAGGATAAGTGTGTGATCTATCTATAAACGCAAGATGTCAGCTGGGC
EST: gi|193342368|gb|FK307258.1|FK307258
EST:     CGACTTATCTCCGGAGACCCACAACTTTTCCGGCGACCAACCGTGCGCAG                         GTGCAAGGATAAGTGTGTGATCTATCTATAAACG
genomic: CGACTTATCTCCGGAGACCCACAACTTTTCCGGCGACCAACCGTGCGCAGgttttttttc ... gcttctacagGTGCAAGGATAAGTGTGTGATCTATCTATAAACG
EST: gi|151399825|gb|EV269696.1|EV269696
EST:     CGACTTATCTCCGGAGACCCACAACTTTTCCGGCGACCAACCGTGCGCAG                         GTGCAAGGATAAGTGTGTGATCTATCTATAAACGCAAGATGTCAGCTGGGC
genomic: CGACTTATCTCCGGAGACCCACAACTTTTCCGGCGACCAACCGTGCGCAGgttttttttc ... gcttctacagGTGCAAGGATAAGTGTGTGATCTATCTATAAACGCAAGATGTCAGCTGGGC
EST: gi|298199205|gb|HO042568.1|HO042568
EST:     CGACTTATCTCCGGAGACCCACAACTTTTCCGGCGACCAACCGTGCGCAG                         GTGCAAGGATAAGTGTGTGATCTATCTATAAACGCAAGATGTCAGCTGGGC
genomic: CGACTTATCTCCGGAGACCCACAACTTTTCCGGCGACCAACCGTGCGCAGgttttttttc ... gcttctacagGTGCAAGGATAAGTGTGTGATCTATCTATAAACGCAAGATGTCAGCTGGGC
EST: gi|192300037|gb|FG992190.1|FG992190
EST:     CGACTTATCTCCGGAGACCCACAACTTTTCCGGCGACCAACCGTGCGCAG                         GTGCAAGGATAAGTGTGTGATCTATCTATAAACGCAAGATGTCAGCTGGGC
genomic: CGACTTATCTCCGGAGACCCACAACTTTTCCGGCGACCAACCGTGCGCAGgttttttttc ... gcttctacagGTGCAAGGATAAGTGTGTGATCTATCTATAAACGCAAGATGTCAGCTGGGC
EST: gi|151395293|gb|EV265164.1|EV265164
EST:     CGACTTATCTCCGGAGACCCACAACTTTTCCGGCGACCAACCGTGCGCAG                         GTGCAAGGATAAGTGTGTGATCTATCTATAAACGCAAGATGTCAGCTGGGC
genomic: CGACTTATCTCCGGAGACCCACAACTTTTCCGGCGACCAACCGTGCGCAGgttttttttc ... gcttctacagGTGCAAGGATAAGTGTGTGATCTATCTATAAACGCAAGATGTCAGCTGGGC
EST: gi|308098933|gb|HO760774.1|HO760774
EST:     CGACTTATCTCCGGAGACCCACAACTTTTCCGGCGACCAACCGTGCGCAG                         GTGCAAGGATAAGTGTGTGATCTATCTATAAACGCAAGATGTCAGCTGGGC
genomic: CGACTTATCTCCGGAGACCCACAACTTTTCCGGCGACCAACCGTGCGCAGgttttttttc ... gcttctacagGTGCAAGGATAAGTGTGTGATCTATCTATAAACGCAAGATGTCAGCTGGGC
EST: gi|192310889|gb|FG998893.1|FG998893
EST:     CGACTTATCTCCGGAGACCCACAACTTTTCCGGCGACCAACCGTGCGCAG                         GTGCAAGGATAAGTGTGTGATCTATCTATAAACGCAAGATGTCAGCTGGGC
genomic: CGACTTATCTCCGGAGACCCACAACTTTTCCGGCGACCAACCGTGCGCAGgttttttttc ... gcttctacagGTGCAAGGATAAGTGTGTGATCTATCTATAAACGCAAGATGTCAGCTGGGC