1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
TCATGATAATCGCTTTCAGGGCTTTAATCAGCTCTCACCAACCCACTTTCTGGTCAGCACTAAGCCCTCTGCTGATGAGAATTTCCCGAACAATCGAAGGgtaggattgttctgcctttgatctcacatttttcggttttagtgagggtttttgcagggttgtgtcgtcaattttgtgtatggaaatttgatacttaatt...
species | Glycine max |
transcript | GLYMA15G40060.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCCTTTGCTGATGAGAATTTCCCGAACAATCGAAGG AGAAGAAATAGTTTTAACCAAGGAAGGAGAAAGGTGAGTGGAAGATCACTAEST: gi|27425564|gb|CA937084.1|CA937084
genomic: CCCTCTGCTGATGAGAATTTCCCGAACAATCGAAGGgtaggattgt ... tctcttgcagAGAAGAAATAGTTTTAACCAAGGAAGGAGAAAGGTGAGTGGAAGATCACTA
EST: TGGTCAGCACTAAGCCCTCTGCTGATGAGAATTTCCCGAACAATCGAAGG AGAAGAAATAGTTTTAACCAAGGAAGGAGAAAGGTGAGTGGAAGATCACTAEST: gi|21677855|gb|BQ630206.1|BQ630206
genomic: TGGTCAGCACTAAGCCCTCTGCTGATGAGAATTTCCCGAACAATCGAAGGgtaggattgt ... tctcttgcagAGAAGAAATAGTTTTAACCAAGGAAGGAGAAAGGTGAGTGGAAGATCACTA
EST: TGGTCAGCACTAAGCCCTCTGCTGATGAGAATTTCCCGAACAATCGAAGG AGAAGAAATAGTTTTAACCAAGGAAGGAGAAAGGTGAGTGGAAGATCACTAEST: gi|58020886|gb|CX707628.1|CX707628
genomic: TGGTCAGCACTAAGCCCTCTGCTGATGAGAATTTCCCGAACAATCGAAGGgtaggattgt ... tctcttgcagAGAAGAAATAGTTTTAACCAAGGAAGGAGAAAGGTGAGTGGAAGATCACTA
EST: TGATGAGAATTTCCCGAACAATCGAAGG AGAAGAAATAGTTTTAACCAAGAAAGGAGAAAGGTGAGTGGAAGATCACTAEST: gi|17962826|gb|BM269583.1|BM269583
genomic: TGATGAGAATTTCCCGAACAATCGAAGGgtaggattgt ... tctcttgcagAGAAGAAATAGTTTTAACCAAGGAAGGAGAAAGGTGAGTGGAAGATCACTA
EST: TGGTCAGCACTAAGCCCTCTGCTGATGAGAATTTCCCGAACAATCGAAGG AGAAGAAATAGTTTTAACCAAGGAAGGAGAAAGGTGAGTGGAAGATCACTAEST: gi|58020497|gb|CX707239.1|CX707239
genomic: TGGTCAGCACTAAGCCCTCTGCTGATGAGAATTTCCCGAACAATCGAAGGgtaggattgt ... tctcttgcagAGAAGAAATAGTTTTAACCAAGGAAGGAGAAAGGTGAGTGGAAGATCACTA
EST: TGCTGATGAGAATTTCCCGAACAATCGAAGG AGAAGAAATAGTTTTAACCAAGGAAGGAGAAAGGTGAGTGGAAGATCACTA
genomic: TGCTGATGAGAATTTCCCGAACAATCGAAGGgtaggattgt ... tctcttgcagAGAAGAAATAGTTTTAACCAAGGAAGGAGAAAGGTGAGTGGAAGATCACTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCATGATAATCGCTTTCAGGGCTTTAATCAGCTCTCACCAACCCACTTTCTGGTCAGCACTAAGCCCTCTGCTGATGAGAATTTCCCGAACAATCGAAGGgtaggattgttctgcctttgatctcacatttttcggttttagtgagggtttttgcagggttgtgtcgtcaattttgtgtatggaaatttgatacttaatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gtgaggg