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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCGCGGCGTAGATCTGAGCAGTTTGGGAAACCCTAACTGCTCTCACCACTCTCTTTGCTTTTTTTCCTCTCCGATCAACGACCTCTTTCGTCGCCCTAAGgttcctctctctcttcttccatcttctctgattcgatgctacctctcgctctccttcaccctgttattttttcgtattcaaccgatgtagttgttatcgc...

Basic information

species Glycine max
transcript GLYMA15G18760.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298169377|gb|HO020737.1|HO020737
EST:     CTCTTTGCNNNNNNNCCTCTCCGATCAACGACCTCTTTCGTCGCCCTAAG                         TCATGGCAGGACTTGCACCCGAGGGATCACAGTTTGATGCTCGTCAATATG
genomic: CTCTTTGCTTTTTTTCCTCTCCGATCAACGACCTCTTTCGTCGCCCTAAGgttcctctct ... catcttgcagTCATGGCAGGACTTGCACCCGAGGGATCACAGTTTGATGCTCGTCAATATG
EST: gi|15814355|gb|BI786630.1|BI786630
EST:     CTCTTTGCNNNNNNNCCTCTCCGATCAACGACCTCTTTCGTCGCCCTAAG                         TCATGGCAGGACTTGCACCCGAGGGATCACAGTTTGATGCTCGTCAATATG
genomic: CTCTTTGCTTTTTTTCCTCTCCGATCAACGACCTCTTTCGTCGCCCTAAGgttcctctct ... catcttgcagTCATGGCAGGACTTGCACCCGAGGGATCACAGTTTGATGCTCGTCAATATG
EST: gi|192295033|gb|FG986752.1|FG986752
EST:     CTCTTTGCCTTTTTTCCTCTCCGATCAACGACCTCTTTCGTCGCCCTAAG                         TCATGGCAGGACTTGCACCCGAGGGATCACAGTTTGATGCTCGTCAATATG
genomic: CTCTTTGCTTTTTTTCCTCTCCGATCAACGACCTCTTTCGTCGCCCTAAGgttcctctct ... catcttgcagTCATGGCAGGACTTGCACCCGAGGGATCACAGTTTGATGCTCGTCAATATG
EST: gi|209712728|gb|BW681582.1|BW681582
EST:     CTCTTTGCNNNNNNNCCTCTCCGATCAACGACCTCTTTCGTCGCCCTAAG                         TCATGGCAGGACTTGCACCCGAGGGATCACAGTTTGATGCTCGTCAATATG
genomic: CTCTTTGCTTTTTTTCCTCTCCGATCAACGACCTCTTTCGTCGCCCTAAGgttcctctct ... catcttgcagTCATGGCAGGACTTGCACCCGAGGGATCACAGTTTGATGCTCGTCAATATG
EST: gi|213591344|gb|DB959886.1|DB959886
EST:     CTCTTTGC-TTTTTTCCTCTCCGATCAACGACCTCTTTCGTCGCCCTAAG                         TCATGGCAGGACTTGCACCCGAGGGATCACAGTTTGATGCTCGTCAATATG
genomic: CTCTTTGCTTTTTTTCCTCTCCGATCAACGACCTCTTTCGTCGCCCTAAGgttcctctct ... catcttgcagTCATGGCAGGACTTGCACCCGAGGGATCACAGTTTGATGCTCGTCAATATG