1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
AGCCACAGTCGCTAAAGAAGCTAAGCTTCAAGTCTCTGAAGCGCGCTCTCGATCTCTTCTCTCCCATTCACGGACACCTCGCTCCTCCCGATGCCGAAAGgtttcgcttcttttcccttttcctcactctctccgtaatctctctcacacaccaaccaacgctgatcgatgcttctgattttctcgtgcag
species | Glycine max |
transcript | GLYMA15G15960.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GATCTCTTCTCTCCCATTCACGGACACCTCGCTCCTCCCGATGCCGAAAG CAAGAAAATCCGCACTAGCCAEST: gi|208039682|gb|GD842890.1|GD842890
genomic: GATCTCTTCTCTCCCATTCACGGACACCTCGCTCCTCCCGATGCCGAAAGgtttcgcttc ... tctcgtgcagCAAGAAAATCCGCACTAGCCA
EST: GATCTCTTCTCTCCCATTCACGGACACCTCGCTCCTCCCGATGCCGAAAG CAAGAAAATCCGCAEST: gi|193517974|gb|FK474033.1|FK474033
genomic: GATCTCTTCTCTCCCATTCACGGACACCTCGCTCCTCCCGATGCCGAAAGgtttcgcttc ... tctcgtgcagCAAGAAAATCCGCA
EST: GATCTCTTCTCTCCCATTCACGGACACCTCGCTCCTCCCGATGCCGAAAG CAAGAAAATCCGCACTAGCCA
genomic: GATCTCTTCTCTCCCATTCACGGACACCTCGCTCCTCCCGATGCCGAAAGgtttcgcttc ... tctcgtgcagCAAGAAAATCCGCACTAGCCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGCCACAGTCGCTAAAGAAGCTAAGCTTCAAGTCTCTGAAGCGCGCTCTCGATCTCTTCTCTCCCATTCACGGACACCTCGCTCCTCCCGATGCCGAAAGgtttcgcttcttttcccttttcctcactctctccgtaatctctctcacacaccaaccaacgctgatcgatgcttctgattttctcgtgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC