1 5' 3' | 2 5' 3' | 3 5' 3' |
CCTCCTCTACGGCACTCGTTTTCGTTCTCGTTCTGgtgcgttttctctctctagggtttttctcttaactattccttataatatttgctaagatgcttattactgcgttattttaatccgattcaggtttatag
species | Glycine max |
transcript | GLYMA15G15800.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ACGGCACTCGTTTTCGTTTCTCGTTCTG ATCTTTGCGAAGGAGGTTTACAGCGCTCAACCAAAGATGCAGAACGAGGAAEST: gi|192326748|gb|FK017345.1|FK017345
genomic: ACGGCACTCGTTTTCG-TTCTCGTTCTGgtgcgttttc ... aggtttatagATCTTTGCGAAGGAGGTTTACAGCGCTCAACCAAAGATGCAGAACGAGGAA
EST: CTCTACGGCACTCGTTTTCGTTCTCGTTCTGGTTTATAGEST: gi|151410687|gb|EV280502.1|EV280502
genomic: CTCTACGGCACTCGTTTTCGTTCTCGTTC-------T-Ggtgcgttttc ... agg
EST: CTCTACGGCACTCGTTTTCGTTCTCGTTCTGGTTTATAGEST: gi|151409443|gb|EV279251.1|EV279251
genomic: CTCTACGGCACTCGTTTTCGTTCTCGTTC-------T-Ggtgcgttttc ... agg
EST: ACGGCACTCGTTTTCGTTCTCGTTCTG ATCTTTGCGAAGGAGGTTTACAGCGCTCAACCAAAGATGCAGAACGAGGAAEST: gi|8826688|gb|BE210418.1|BE210418
genomic: ACGGCACTCGTTTTCGTTCTCGTTCTGgtgcgttttc ... aggtttatagATCTTTGCGAAGGAGGTTTACAGCGCTCAACCAAAGATGCAGAACGAGGAA
EST: GTTTTCGTTCTCGTTCTG ATCTTTGCGAAGGAGGTTTACAGCGCTCAACCAAAGATGCAGAACGAGGAA
genomic: GTTTTCGTTCTCGTTCTGgtgcgttttc ... aggtttatagATCTTTGCGAAGGAGGTTTACAGCGCTCAACCAAAGATGCAGAACGAGGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCTCCTCTACGGCACTCGTTTTCGTTCTCGTTCTGgtgcgttttctctctctagggtttttctcttaactattccttataatatttgctaagatgcttattactgcgttattttaatccgattcaggtttatag
CTCCTC