1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GAGGTGCCGCACTGCTCCCACCGAAGGCGTTTCCTTCACTATCCAACAATTCACCGACGCTCTCGACAAGTACGACTTCGACGCCGAAATGGGCACCAAGgcacgttcctcttcccttcactctccaacttttcaattcaacttgtgtactacgcattattagagtcttttgtgtttacctagtttactatactgcgtgg...
species | Glycine max |
transcript | GLYMA15G14550.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCACCGACGCTCTCGACAAGTACGACTTCGACGCCGAAATGGGCACCAAG GTTAAGGGCACNGTTTTTGCCACAGATAACAGCGGAGCTTATGTTGACATTEST: gi|18730522|gb|BM525924.1|BM525924
genomic: TCACCGACGCTCTCGACAAGTACGACTTCGACGCCGAAATGGGCACCAAGgcacgttcct ... gtgttttcagGTTAAGGGCACTGTTTTTGCCACAGATAACAGCGGAGCTTATGTTGACATT
EST: TCACCGACGCTCTCGACAAGTACGACTTCGACGCCGAAATGGGCACCAAG GTTAAGGGCACTGTTTTTGCCACAGATAACAGCGGAGCTTATGTTGACATTEST: gi|192319699|gb|FK011851.1|FK011851
genomic: TCACCGACGCTCTCGACAAGTACGACTTCGACGCCGAAATGGGCACCAAGgcacgttcct ... gtgttttcagGTTAAGGGCACTGTTTTTGCCACAGATAACAGCGGAGCTTATGTTGACATT
EST: CACCGACGCTCTCGACAAGTACGACTTCAACGCCGAAATGGGCACCAAG GTTAAGGGCACTGTTTTTGCCACGGATAACAATGGAGCTTATGTTGACATTEST: gi|207777149|gb|GD748244.1|GD748244
genomic: CACCGACGCTCTCGACAAGTACGACTTCGACGCCGAAATGGGCACCAAGgcacgttcct ... gtgttttcagGTTAAGGGCACTGTTTTTGCCACAGATAACAGCGGAGCTTATGTTGACATT
EST: CTTCGACGCCGAAATGGGCACCAAG GTTAAGGGCACNGTTTTTGCCACAGATAACAGCGGAGCTTATGTTGACATTEST: gi|120533109|gb|EH261242.1|EH261242
genomic: CTTCGACGCCGAAATGGGCACCAAGgcacgttcct ... gtgttttcagGTTAAGGGCACTGTTTTTGCCACAGATAACAGCGGAGCTTATGTTGACATT
EST: TCACCGACGCTCTCGACAAGTACGACTTCGACGCCGAAATGGGCACCAAG GTTAAGGGCACTGTTTTTGCCACAGATAACAGCGGAGCTTATGTTGACATT
genomic: TCACCGACGCTCTCGACAAGTACGACTTCGACGCCGAAATGGGCACCAAGgcacgttcct ... gtgttttcagGTTAAGGGCACTGTTTTTGCCACAGATAACAGCGGAGCTTATGTTGACATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGGTGCCGCACTGCTCCCACCGAAGGCGTTTCCTTCACTATCCAACAATTCACCGACGCTCTCGACAAGTACGACTTCGACGCCGAAATGGGCACCAAGgcacgttcctcttcccttcactctccaacttttcaattcaacttgtgtactacgcattattagagtcttttgtgtttacctagtttactatactgcgtgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctcttcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cactctcc