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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGCTCCATCAACTCGTATCGCTTGTCCAACCTCACTCCCTCTGAGCTTCAGAGCCTCAAGAGCCGACCTCGTATCGATTTCTCTTCCATTTTCAGTGTTgtgagtaatgaatgggttttctttccctttgttttcaaatgggtcactctcaaaattgttcctttttttttccctttcag

Basic information

species Glycine max
transcript GLYMA15G13910.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209697022|gb|BW667012.1|BW667012
EST:     AGAGCCTCAAGAGCCGACCTCGTATCGATTTCTCTTCCATTTTCAGTGTT                         GTTAACCCCATTGTCGATGACGCCCACAAAAGAGGGGATGCTGCAGTTAAA
genomic: AGAGCCTCAAGAGCCGACCTCGTATCGATTTCTCTTCCATTTTCAGTGTTgtgagtaatg ... tccctttcagGTTAACCCCATTGTCGATGATGTTCACAAAAGAGGGGATGCTGCAGTTAAA
EST: gi|9819508|gb|BE555021.1|BE555021
EST:     AGAGCCTCAAGAGCCGACCTCGTATCGATTTCTCTTCCATTTTCAGTGTT                         GTTAACCCCATTGTCGATGATGTTCACAAAAGAGGGGATGCTGCAGTTAAA
genomic: AGAGCCTCAAGAGCCGACCTCGTATCGATTTCTCTTCCATTTTCAGTGTTgtgagtaatg ... tccctttcagGTTAACCCCATTGTCGATGATGTTCACAAAAGAGGGGATGCTGCAGTTAAA
EST: gi|213620319|gb|DB961464.1|DB961464
EST:     AGAGCCTCAAGAGCCGACCTCGTATCGATTTCTCTTCCATTTTCAGTGTT                         GTTAACCCCATTGTCGATGATGTTCACAAAAGAGGGGATGCTGCAGTTAAA
genomic: AGAGCCTCAAGAGCCGACCTCGTATCGATTTCTCTTCCATTTTCAGTGTTgtgagtaatg ... tccctttcagGTTAACCCCATTGTCGATGATGTTCACAAAAGAGGGGATGCTGCAGTTAAA