1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TGTCTCGTTCTGACGGCTGATCCCAAGCCTCGTCTTCGTTGGACTCAGGACTTGCATGAACGGTTCGTTGATGCGGTAACGCAGCTTGGGGGAGCAAGTAgtgagtgtcttttaactgtttactttgtcaaagttgaagcctttttttttttgttaatgaagttggattttgtttttatgacacttgcacaattttttgt...
species | Glycine max |
transcript | GLYMA15G12930.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTTGCATGAACGGTTCGTTGATGCGGTAACGCAGCTTGGGGGAGCAAGTA AAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCEST: gi|192314434|gb|FK008404.1|FK008404
genomic: CTTGCATGAACGGTTCGTTGATGCGGTAACGCAGCTTGGGGGAGCAAGTAgtgagtgtct ... ttatctgcagAAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTC
EST: CTTGCATGAACGGTTCGTTGATGCGGTAACGCAGCTTGGGGGAGCAAGTA AAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCEST: gi|192314435|gb|FK008405.1|FK008405
genomic: CTTGCATGAACGGTTCGTTGATGCGGTAACGCAGCTTGGGGGAGCAAGTAgtgagtgtct ... ttatctgcagAAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTC
EST: CTTGCATGAACGGTTCGTTGATGCGGTAACGCAGCTTGGGGGAGCAAGTA AAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCEST: gi|27446180|gb|CA953303.1|CA953303
genomic: CTTGCATGAACGGTTCGTTGATGCGGTAACGCAGCTTGGGGGAGCAAGTAgtgagtgtct ... ttatctgcagAAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTC
EST: CTTGCATGAACGGTTCGTTGATGCGGTAACGCAGCTTGGGGGAGCAAGTA AAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCEST: gi|193640141|gb|FK590944.1|FK590944
genomic: CTTGCATGAACGGTTCGTTGATGCGGTAACGCAGCTTGGGGGAGCAAGTAgtgagtgtct ... ttatctgcagAAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTC
EST: CTTGCATGAACGGTTCGTTGATGCGGTAACGCAGCTTGGGGGAGCAAGTA AAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTC
genomic: CTTGCATGAACGGTTCGTTGATGCGGTAACGCAGCTTGGGGGAGCAAGTAgtgagtgtct ... ttatctgcagAAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTCTCGTTCTGACGGCTGATCCCAAGCCTCGTCTTCGTTGGACTCAGGACTTGCATGAACGGTTCGTTGATGCGGTAACGCAGCTTGGGGGAGCAAGTAgtgagtgtcttttaactgtttactttgtcaaagttgaagcctttttttttttgttaatgaagttggattttgtttttatgacacttgcacaattttttgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG