1 5' 3' | 2 5' 3' | 3 5' 3' |
TAGAAAAAGGTTATTTGTCAGATCCTTCTGTTTCACTTGCACTACTGATGCCTTTTCGGGAACCCAGATTTCCACCATTCTGAGTAACTTCACACACCATgtaagtgccttttcccttcttttatcccttccctccttgcattttcccatgtggactcgtctttgctcttacataaaacaccatgatctgtatttttttt...
species | Glycine max |
transcript | GLYMA15G11590.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ATTCTGAGTAACTTCACACACCAT ATAACAGAAAATGAGGTGGGGCTTGTGGCAACTTGGGCAATCAATCCCTCGEST: gi|298196060|gb|HO044451.1|HO044451
genomic: ATTCTGAGTAACTTCACACACCATgtaagtgcct ... tattcctcagATAACAGAAAATGAGGTGGGGCTTGTGGAAACTTGGGCAATCAATCCCTCG
EST: CCTTTTCGGGAACCCAGATTTCCACCATTCTGAGTAACTTCACACACCAT ATAACAGAAAATGAGGTGGGGCTTGTGGCAACTTGGGCAATCAATCCCTCGEST: gi|7590146|gb|AW705905.1|AW705905
genomic: CCTTTTCGGGAACCCAGATTTCCACCATTCTGAGTAACTTCACACACCATgtaagtgcct ... tattcctcagATAACAGAAAATGAGGTGGGGCTTGTGGAAACTTGGGCAATCAATCCCTCG
EST: CCTTTTCGGGAACCCAGATTTCCACCATTCTGAGTAACTTCACACACCAT ATAACAGAAAATGAGGTGGGGCTTGTGGAAACTTGGGCAATCAATCCCTCG
genomic: CCTTTTCGGGAACCCAGATTTCCACCATTCTGAGTAACTTCACACACCATgtaagtgcct ... tattcctcagATAACAGAAAATGAGGTGGGGCTTGTGGAAACTTGGGCAATCAATCCCTCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAGAAAAAGGTTATTTGTCAGATCCTTCTGTTTCACTTGCACTACTGATGCCTTTTCGGGAACCCAGATTTCCACCATTCTGAGTAACTTCACACACCATgtaagtgccttttcccttcttttatcccttccctccttgcattttcccatgtggactcgtctttgctcttacataaaacaccatgatctgtatttttttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccttttcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttccctc