1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
AATTCCGAGCCGGGTTTCTTGTTAGCACTGTTAACTTCCTCTAATGGCTCATCGCTACGATAGTAATCCCTTCGACGAAGAAGAAGTCAACCCCTTCTCCgtaagtccctttctctcttccccatgagtgttgctttctcaaagttgagtttttgttaactgggtatgaacttttttctgaacttggtcttgttcagtgg...
species | Glycine max |
transcript | GLYMA15G07480.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ATCGCTACGATAGTAATCCCTTCGACGAAGAAGAAGTCAACCCCTTCTCC GAACCAGCTGTAAGGGGAAAAACATCAAGCCAATCAAGTTATAGCGGGGGTEST: gi|298183413|gb|HO028626.1|HO028626
genomic: ATCGCTACGATAGTAATCCCTTCGACGAAGAAGAAGTCAACCCCTTCTCCgtaagtccct ... acacttacagGAACCAGCTGTAAGGGGAAAAACATCAAGCCAATCAAGTTATAGCGGGGGT
EST: ATCGCTACGATAGTAATCCCTTCGACGAAGAAGAAGTCAACCCCTTCTCC GAACCAGCTGTAAGGGGAAAAACATCAAGCCAATCAAGTTATAGCGGGGGTEST: gi|16346749|gb|BI972344.1|BI972344
genomic: ATCGCTACGATAGTAATCCCTTCGACGAAGAAGAAGTCAACCCCTTCTCCgtaagtccct ... acacttacagGAACCAGCTGTAAGGGGAAAAACATCAAGCCAATCAAGTTATAGCGGGGGT
EST: ATCGCTACGATAGTAATCCCTTCGACGAAGAAGAAGTCAACCCCTTCTCC GAACCAGCTGTAAGGGGAAAAACATCAAGCCAATCAAGTTATAGCGGGGGTEST: gi|16346347|gb|BI971942.1|BI971942
genomic: ATCGCTACGATAGTAATCCCTTCGACGAAGAAGAAGTCAACCCCTTCTCCgtaagtccct ... acacttacagGAACCAGCTGTAAGGGGAAAAACATCAAGCCAATCAAGTTATAGCGGGGGT
EST: ATCGCTACGATAGTAATCCCTTCGACGAAGAAGAAGTCAACCCCTTCTCC GAACCAGCTGTAAGGGGAAAAACATCAAGCCAATCAAGTTATAGCGGGGGTEST: gi|38192157|gb|CF921363.1|CF921363
genomic: ATCGCTACGATAGTAATCCCTTCGACGAAGAAGAAGTCAACCCCTTCTCCgtaagtccct ... acacttacagGAACCAGCTGTAAGGGGAAAAACATCAAGCCAATCAAGTTATAGCGGGGGT
EST: ATCGCTACGATAGTAATCCCTTCGACGAAGAAGAAGTCAACCCCTTCTCC GAACCAGCTGTAAGGGGAAAAACATCAAGCCAATCAAGTTATAGCGGGGGT
genomic: ATCGCTACGATAGTAATCCCTTCGACGAAGAAGAAGTCAACCCCTTCTCCgtaagtccct ... acacttacagGAACCAGCTGTAAGGGGAAAAACATCAAGCCAATCAAGTTATAGCGGGGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATTCCGAGCCGGGTTTCTTGTTAGCACTGTTAACTTCCTCTAATGGCTCATCGCTACGATAGTAATCCCTTCGACGAAGAAGAAGTCAACCCCTTCTCCgtaagtccctttctctcttccccatgagtgttgctttctcaaagttgagtttttgttaactgggtatgaacttttttctgaacttggtcttgttcagtgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT