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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCTGCAAGACTCGTTAGAAACGACGTCGTCTTTATGCCTTCCTCCGAGGAATCTCACAGGCTCTGGTGCCATAAACTTCGTGAATTCATTGATTCTCTCGgtaaattaaatttcacctctgtctcgttacgtttaaggttaaaagtaattctgagctctcttgaagtgaaatccaaacatgtactgaaatgcag

Basic information

species Glycine max
transcript GLYMA15G07340.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151396112|gb|EV265989.1|EV265989
EST:     ATCTCACAGGCTCTGGTGCCATAAACTTCGTGAATTCATTGATTCTCTCG                         GTCGTCCTAAGAGGTTGTTGGTTTTTGTTAATCCGTTTGGTGGGAAGAAAT
genomic: ATCTCACAGGCTCTGGTGCCATAAACTTCGTGAATTCATTGATTCTCTCGgtaaattaaa ... tgaaatgcagGTCGTCCTAAGAGGTTGTTGGTTTTTGTTAATCCGTTTGGTGGGAAGAAAT
EST: gi|209719239|gb|BW679792.1|BW679792
EST:     ATCTCACAGGCTCTGGTGCCATAAACTTCGTGAATTCATTGATTCTCTCG                         GTCGTCCTAAGAGGTTGTTGG
genomic: ATCTCACAGGCTCTGGTGCCATAAACTTCGTGAATTCATTGATTCTCTCGgtaaattaaa ... tgaaatgcagGTCGTCCTAAGAGGTTGTTGG
EST: gi|209715235|gb|BW668563.1|BW668563
EST:     ATCTCACAGGCTCTGGTGCCATAAACTTCGTGAATTCATTGATTCTCTCG                         GTCGTCCTAAGAGGTTGTTGGTTTTTGTTAATCCGTTTGGTGGGAAGAAAT
genomic: ATCTCACAGGCTCTGGTGCCATAAACTTCGTGAATTCATTGATTCTCTCGgtaaattaaa ... tgaaatgcagGTCGTCCTAAGAGGTTGTTGGTTTTTGTTAATCCGTTTGGTGGGAAGAAAT
EST: gi|15202824|gb|BI425602.1|BI425602
EST:     ATCTCACAGGTTCTGGTGCCATAAACTTCGTGAATTCATTGATTCTCTCG                         GTCGTCCTAAGAGGTTGTTGGTTTTTGTTAATCCGTTTGGTGGGAAGAAAT
genomic: ATCTCACAGGCTCTGGTGCCATAAACTTCGTGAATTCATTGATTCTCTCGgtaaattaaa ... tgaaatgcagGTCGTCCTAAGAGGTTGTTGGTTTTTGTTAATCCGTTTGGTGGGAAGAAAT
EST: gi|193437052|gb|FK402961.1|FK402961
EST:     ATCTCACAGGCTCTGGTGCCATAAACTTCGTGAATTCATTGATTCTCTCG                         GTCGTCCTAAGAGGTTGTTGGTTTTTGTTAATCCGTTTGGTGGGAAGAAAT
genomic: ATCTCACAGGCTCTGGTGCCATAAACTTCGTGAATTCATTGATTCTCTCGgtaaattaaa ... tgaaatgcagGTCGTCCTAAGAGGTTGTTGGTTTTTGTTAATCCGTTTGGTGGGAAGAAAT