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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGTGCCTGAATCTGTATATAATAATGCCCGTAATTTGGTTGAATATTGCTGCTTTAGATTTTTGTCAAGGGATGGTTCTGATATTCATCCTTCCCTCCAGgtattgaagaactgttctttggatgatttgttagaaaccatgtctgatgttcattttctgttctgttttatctaagttcatcatggtctcatcaaacatt...

Basic information

species Glycine max
transcript GLYMA15G05220.1
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA15G05220.1 (Glycine max), 5'ss of exon 1
lower sequence: Vv12s0034g01220.t01 (Vitis vinifera), 5'ss of exon 3
TGTGCCTGAATCTGTATATAATAATGCCCGTAATTTGGTTGAATATTGCTGCTTTAGATTTTTGTCAAGGGATGGTTCTGATATTCATCCTTCCCTCCAGgtattgaagaactgttctttggatgatttgttagaaaccatgtctgatgttcattttctgttctgttttatctaagttcatcatggtctcatcaaacatt--
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TGTTCCTGAAACTGTCTATAACGATGCCCGTAATTTGGTGGAATATTGCTGCTTTAGGTTCTTGTCAAGAGATAGTTCTGATATTCATCCTTGCCTCAAGgt-ttgtagattaagtataagcatattgcattcatttctttctttcat-ctggttttcctttctattttctctggtcttccaagagtttgcagcttcacttt