1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CAAAGATGCTAAGATCATCAAGGAAGAAATGCTTGAGGCCATTGCACCGCTTGATCGAGGGGCTGATGCCACTCCCCAAGACCAGCAAACAATTGATCAGgtcagctcaattgcatgtctacaatgaatgaaagctaattagtgttaattactttgtcaggggtctaactcaattggttcagcagaatgctagagttatt...
species | Glycine max |
transcript | GLYMA15G05210.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TTGATCGAGGGGCTGATGCCACTCCCCAAGACCAGCAAACAATTGATCAG ATTGCGCGGGAACTTGAGGCAGTTACTCCAATAAAGGAGCCCCTCAAAACTEST: gi|13787532|gb|BG650124.1|BG650124
genomic: TTGATCGAGGGGCTGATGCCACTCCCCAAGACCAGCAAACAATTGATCAGgtcagctcaa ... ttcttaatagATTGCGCGGGAACTTGAGGCAGTTACTCCAATAAAGGAGCCCCTCAAAACT
EST: TTGATCGAGGGGCTGATGCCACTCCCCAAGACCAGCAAACAATTGATCAG ATTGCGCGGGAACTTGAGGCAGTTACTCCAATAAAGGAGCCCCTCAAAACTEST: gi|17153711|gb|BM143644.1|BM143644
genomic: TTGATCGAGGGGCTGATGCCACTCCCCAAGACCAGCAAACAATTGATCAGgtcagctcaa ... ttcttaatagATTGCGCGGGAACTTGAGGCAGTTACTCCAATAAAGGAGCCCCTCAAAACT
EST: CAATTGATCAG ATTGCGCGGGAACTTGAGGCAGTTACTCCAATAAAGGAGCCCCTCAAAACTEST: gi|213593886|gb|DB961886.1|DB961886
genomic: CAATTGATCAGgtcagctcaa ... ttcttaatagATTGCGCGGGAACTTGAGGCAGTTACTCCAATAAAGGAGCCCCTCAAAACT
EST: TTGATCGAGGGGCTGATGCCACTCCCCAAGACCAGCAAACAATTGATCAG ATTGCGCGGGAACTTGAGGCAGTTACTCCAATAAAGGAGCCCCTCAAAACT
genomic: TTGATCGAGGGGCTGATGCCACTCCCCAAGACCAGCAAACAATTGATCAGgtcagctcaa ... ttcttaatagATTGCGCGGGAACTTGAGGCAGTTACTCCAATAAAGGAGCCCCTCAAAACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAAAGATGCTAAGATCATCAAGGAAGAAATGCTTGAGGCCATTGCACCGCTTGATCGAGGGGCTGATGCCACTCCCCAAGACCAGCAAACAATTGATCAGgtcagctcaattgcatgtctacaatgaatgaaagctaattagtgttaattactttgtcaggggtctaactcaattggttcagcagaatgctagagttatt
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