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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTCCCGCCGGCTTATCGGCGGCGATACGGCTCAAGCAAATGTGCCGCGAACGAAACGCCGATTTGTCCGTCTGTGTCCTCGAGAAAGGTGCCGAAGTCGgtaagtaatgttaacgtacttaatttctattttgactgaatttaatgtttattttatgatattcgcaaattctgtgtgttgttgcgcttag

Basic information

species Glycine max
transcript GLYMA15G03360.1
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA15G03360.1 (Glycine max), 5'ss of exon 1
lower sequence: Vv05s0102g01110.t01 (Vitis vinifera), 5'ss of exon 1
GGTCCCGCCGGCTTATCGGCGGCGATACGGCTCAAGCAAATGTGCCGCGAACGAAACGCCGATTTGTCCGTCTGTGTCCTCGAGAAAGGTGCCGAAGTCGgtaagtaatgttaacgtactt------aattt--ctattttgactgaat-ttaatgttta--ttttatgatattcgcaaattctgtgtgttgttgcgcttag
|| ||  | || ||||||||||| |||||| | |||||||||||||||| |    | |  ||||| || || |||||  | |||||||| |||||||| ||||  |  |  |   ||||||      | |||   |||  | |||| ||  |  ||||||   ||  ||   ||      |||  | | || | |  || | 
GGGCCTTCGGGTTTATCGGCGGCAATACGGTTGAAGCAAATGTGCCGCGCAAAGGATGTTGATTTTTCGGTTTGTGTTGTGGAGAAAGGAGCCGAAGTGGgta--tggttctcttgtactttggtgaagtttgattatccttactggatgcttttgtttaagcttagtgcctttttttttttcctttttttctgggtctgaa