1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CAAATAGTGCCAACCCACTCTTTAACTATTTCCCTTTTCAACCATTGCTTAGATGCTCTCTAAGCCTTCATCTGCTATGCCCACTTTTCCTTCTTCCATGgtttgcctctctctctctctctctctctactctcctttcatttcagaaatcatggggaaataaacataattaatctccgaaataaacaaaacatttttcg...
species | Glycine max |
transcript | GLYMA15G03320.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AGATGCTCTCTAAGCCTTCATCTGCTATGCCCACTTTTCCTTCTTCCACG GTGAGAAGTGGGTTGTGCGTGTGGCCAAATGTGAGACAACTTTGCTTTAGAEST: gi|208261500|gb|GE059155.1|GE059155
genomic: AGATGCTCTCTAAGCCTTCATCTGCTATGCCCACTTTTCCTTCTTCCATGgtttgcctct ... tctttcttagGTGAGAAGTGGGTTGTGCGTGTGGCCAAATGTGAGACAACTTTGCTTTAGA
EST: AGATGCTCTCTAAGCCTTCATCTGCTATGCCCACTTTTCCTTCTTCCATG GTGAGAAGTGGGTTGTGCGTGTGGCCAAATGTGAGACAACTTTGCTTTAGAEST: gi|21594629|gb|BQ610215.1|BQ610215
genomic: AGATGCTCTCTAAGCCTTCATCTGCTATGCCCACTTTTCCTTCTTCCATGgtttgcctct ... tctttcttagGTGAGAAGTGGGTTGTGCGTGTGGCCAAATGTGAGACAACTTTGCTTTAGA
EST: CTGCTATGCCCACTTTTCCTTCTTCCATG GTGAGAAGTGGGTTGTGCGTGTGGCCAAATGTGAGACAACTTTGCTTTAGAEST: gi|298180920|gb|HO022359.1|HO022359
genomic: CTGCTATGCCCACTTTTCCTTCTTCCATGgtttgcctct ... tctttcttagGTGAGAAGTGGGTTGTGCGTGTGGCCAAATGTGAGACAACTTTGCTTTAGA
EST: AGATGCTCCCTAAGCCTTCATCTGCTATGCCCACTTTTCCTTCTTCCATG GTGAGAAGTAGGTTGTGCGTGTGGCCAAATGTGAGACAACTTTGCTTTAGAEST: gi|23731943|gb|BU764121.1|BU764121
genomic: AGATGCTCTCTAAGCCTTCATCTGCTATGCCCACTTTTCCTTCTTCCATGgtttgcctct ... tctttcttagGTGAGAAGTGGGTTGTGCGTGTGGCCAAATGTGAGACAACTTTGCTTTAGA
EST: AGATGCTCTCTAAGCCTTCATCTGCTATGCCCACTTTTCCTTCTTCCATG GTGAGAAGTGGGTTGTGCGTGTGGCCAAATGTGAGACAACTTTGCTTTAGA
genomic: AGATGCTCTCTAAGCCTTCATCTGCTATGCCCACTTTTCCTTCTTCCATGgtttgcctct ... tctttcttagGTGAGAAGTGGGTTGTGCGTGTGGCCAAATGTGAGACAACTTTGCTTTAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAAATAGTGCCAACCCACTCTTTAACTATTTCCCTTTTCAACCATTGCTTAGATGCTCTCTAAGCCTTCATCTGCTATGCCCACTTTTCCTTCTTCCATGgtttgcctctctctctctctctctctctactctcctttcatttcagaaatcatggggaaataaacataattaatctccgaaataaacaaaacatttttcg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctctctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctctcct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggaaataa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaacaaaa