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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCCCTCAACCAATCCCTAACGGACGCAACCTTCTCTCTTCAGCTCCTCTTTTCAACCTCTGCCGGAATCCGCCAATTAGGTTCTGATCAACCTTTCACAGgtatgccacttctctttcaattcgtctctcgcattcctcctcgtccgctttctctttccaattcctctccgttagctatttatttctatgcatgctttga...

Basic information

species Glycine max
transcript GLYMA15G03190.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|17023990|gb|BM095024.1|BM095024
EST:     TTCAACCTCTGCCGGAATCCGCCAATTAGGTTCTGATCAACCTTTCACAG                         ATTAGAGGGGCAGGGGCTGTAAGTGAGGATGAATTTGCAACAAGCTGGGCA
genomic: TTCAACCTCTGCCGGAATCCGCCAATTAGGTTCTGATCAACCTTTCACAGgtatgccact ... tcattcctagATTAGAGGGGCAGGGGCTGTAAGTGAGGATGAATTTGCAACAAGCTGGGCA
EST: gi|192323551|gb|FK019022.1|FK019022
EST:     TTCAACCTCTGCCGGAATCCGCCAATTAGGTTCTGATCAACCTTTCACAG                         ATTAGAGGGGCAGGGGCTGTAAGTGAGGATGAATTTGCAACAAGCTGGGCA
genomic: TTCAACCTCTGCCGGAATCCGCCAATTAGGTTCTGATCAACCTTTCACAGgtatgccact ... tcattcctagATTAGAGGGGCAGGGGCTGTAAGTGAGGATGAATTTGCAACAAGCTGGGCA
EST: gi|11413014|gb|BF425034.1|BF425034
EST:     TTCAACCTCTGCCGGAATCCGCCAATTAGGTTCTGATCAACCTTTCACAG                         ATTAGAGGGGCAGGGGCTGTAAGTGAGGATGAATTTGCAACAAGCTGGGCA
genomic: TTCAACCTCTGCCGGAATCCGCCAATTAGGTTCTGATCAACCTTTCACAGgtatgccact ... tcattcctagATTAGAGGGGCAGGGGCTGTAAGTGAGGATGAATTTGCAACAAGCTGGGCA