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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTCCACCTCTCTCTTCAATTTCTCTTCTGGAAACCCGAGAATCGAGGAGACCCGTGGCCTCATGCATCTCTTCCCAGACGACACTCCTTCTACTCTACCCgtatcctccttctattcttcttccatcgatatattctgcttttacgcatgataattaatgaatgaatcaagtttcgttttggtgttag

Basic information

species Glycine max
transcript GLYMA15G00770.2
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA15G00770.2 (Glycine max), 5'ss of exon 1
lower sequence: Vv00s0125g00250.t01 (Vitis vinifera), 5'ss of exon 1
CTCCACCTCTCTCTTCAATTTCTCTTCTGGAAACCCGAGAATCGAGGAGACCCGTGGCCTCATGCATCTCTTCCCAGACGACACTCCTTCTACTCTACCCgtatcctccttctattcttc-ttccatcgatatattctgcttttacgcatgataattaatgaatgaat-----caagtttcgttttggtgttag----------------
         ||  ||   |||||||||||||||||| |||||||| || ||| | ||  |||||||||||| ||  |||||||   |   | |     | | ||| ||||   |       ||| ||     | ||    ||  |  |   ||| ||| |   || ||     ||| | |  |      ||| |                
---------TCAGTTGCCTTTCTCTTCTGGAAACCCCAGAATCGAAGAAACCAGAGGAGTCATGCATCTCTACCGTGACGACATCTCCCTTTCGTCTTCTG-ATCTTCCTgtaagcggagattctatttccttgtttgttttccaacctgaatagttagtctgtgtatagcatcaattcttatgcgcccgtttgtttctcggtaaaatat