1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CCTGTCTTCCATCAGAGTCTTCAAGTCCGGGGGAGCCCCTCTCGGTAAGGAACTCGAAGACACTCTCAGAGCTAAATTCCCCAACGCCAAACTTGGCCAGgtacccctaccttcaccttctttttcctctcccacctcccaattcttctaataaatgtatactttctcaaccaacttttttttctggatcaataactatg...
species | Glycine max |
transcript | GLYMA15G00390.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AGACACTCTCAGAGCTAAATTCCCCAACGCCAAACTTGGCCAG GGATACGGAATGACTGAGGCAGGGCCTGTGCTAACAATGTCTTTAGCTTTTEST: gi|26057295|gb|CA800209.1|CA800209
genomic: AGACACTCTCAGAGCTAAATTCCCCAACGCCAAACTTGGCCAGgtacccctac ... ataaatacagGGATACGGAATGACTGAGGCAGGGCCTGTGCTAACAATGTCTTTAGCTTTT
EST: AACTCGAAGACACTCTCAGAGCTAAATTCCCCAACGCCAAACTTGGCCAG GGATACGGAATGACTGAGGCAGGGCCTGTGCTAACAATGTCTTTAGCTTTT
genomic: AACTCGAAGACACTCTCAGAGCTAAATTCCCCAACGCCAAACTTGGCCAGgtacccctac ... ataaatacagGGATACGGAATGACTGAGGCAGGGCCTGTGCTAACAATGTCTTTAGCTTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCTGTCTTCCATCAGAGTCTTCAAGTCCGGGGGAGCCCCTCTCGGTAAGGAACTCGAAGACACTCTCAGAGCTAAATTCCCCAACGCCAAACTTGGCCAGgtacccctaccttcaccttctttttcctctcccacctcccaattcttctaataaatgtatactttctcaaccaacttttttttctggatcaataactatg
- - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccttcacc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctctccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -acctccc