1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GTCGGTGGTATGATTCATCATTCTCTTTCAGTTTTTGGCATTGAAGAATCTGAGATCGGAAAATTCACCTCTCCAACCCCCAATCCCATCGTTGCAAATGgttcgttcataattctattccctctttcgttccattttttttttcatttttgaatgattgttttcccctttttccgcattcgcag
species | Glycine max |
transcript | GLYMA14G40430.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GAGATCGGAAAATTCANNNCTCCAACCCCCAATCCCATCGTTGCAAATG ATCCGATTCATTCTGTTGCAGAACAGGCAGGGCAAGACCCGTCTTGCCAAAEST: gi|58022169|gb|CX708910.1|CX708910
genomic: GAGATCGGAAAATTCACCTCTCCAACCCCCAATCCCATCGTTGCAAATGgttcgttcat ... gcattcgcagATCCGATTCATTCTGTTGCAGAACAGGCAGGGCAAGACCCGTCTTGCCAAA
EST: TGAGATCGGAAAATTCACCTCTCCAACCCCCAATCCCATCGTTGCAAATG ATCCGATTCATTCTGTTGCAGAACAGGCAGGGCAAGACCCGTCTTGCCAAAEST: gi|298170111|gb|HO018735.1|HO018735
genomic: TGAGATCGGAAAATTCACCTCTCCAACCCCCAATCCCATCGTTGCAAATGgttcgttcat ... gcattcgcagATCCGATTCATTCTGTTGCAGAACAGGCAGGGCAAGACCCGTCTTGCCAAA
EST: GAGATCGGAAAATTCACCTCTCCAACCCCCAATCCCATCGTTGCAAATG ATCCGATTCATTCTGTTGCAGAACAGGCAGGGCAAGACCCGTCTTGCCAAAEST: gi|4297809|gb|AI442671.1|AI442671
genomic: GAGATCGGAAAATTCACCTCTCCAACCCCCAATCCCATCGTTGCAAATGgttcgttcat ... gcattcgcagATCCGATTCATTCTGTTGCAGAACAGGCAGGGCAAGACCCGTCTTGCCAAA
EST: TGAGATCGGAAAATTCACCTCTCCAACCCCCAATCCCATCGTTGCAAATG ATCCGATTCATTCTGTTGCAGAACAGGCAGGGCAAGACCCGTCTTGCCAAAEST: gi|33388323|gb|CA851530.1|CA851530
genomic: TGAGATCGGAAAATTCACCTCTCCAACCCCCAATCCCATCGTTGCAAATGgttcgttcat ... gcattcgcagATCCGATTCATTCTGTTGCAGAACAGGCAGGGCAAGACCCGTCTTGCCAAA
EST: TGAGATCGGAAAATTCACCTCTCCAACCCCCAATCCCATCGTTGCAAATG ATCCGATTCATTCTGTTGCAGAACAGGCAGGGCAAGACCCGTCTTGCCAAAEST: gi|15661937|gb|BI699308.1|BI699308
genomic: TGAGATCGGAAAATTCACCTCTCCAACCCCCAATCCCATCGTTGCAAATGgttcgttcat ... gcattcgcagATCCGATTCATTCTGTTGCAGAACAGGCAGGGCAAGACCCGTCTTGCCAAA
EST: TGAGATCGGAAAATTCACCTCTCCAACCCCCAATCCCATCGTTGCAAATG ATCCGATTCATTCTGTTGCAGAACAGGCAGGGCAAGACCCGTCTTGCCAAAEST: gi|58022417|gb|CX709158.1|CX709158
genomic: TGAGATCGGAAAATTCACCTCTCCAACCCCCAATCCCATCGTTGCAAATGgttcgttcat ... gcattcgcagATCCGATTCATTCTGTTGCAGAACAGGCAGGGCAAGACCCGTCTTGCCAAA
EST: TCCAACCCCCAATCCCATCG-TGNCAAATG ATCCGATTCATTCTGTTGCAGAACAGGCAGGGCAAGACCCGTCTTGCCAAEST: gi|33388305|gb|CA851512.1|CA851512
genomic: TCCAACCCCCAATCCCATCGTTG-CAAATGgttcgttcat ... gcattcgcagATCCGATTCATTCTGTTGCAGAACAGGCAGGGCAAGACCCGTCTTGCCAA
EST: CTCTCCAACCCCCAATCCCATCGTTGCAAATG ATCCGATTCATTCTGTTGCAGAACAGGCAGGGCAAGACCCGTCTTGCCAAAEST: gi|9258866|gb|BE347013.1|BE347013
genomic: CTCTCCAACCCCCAATCCCATCGTTGCAAATGgttcgttcat ... gcattcgcagATCCGATTCATTCTGTTGCAGAACAGGCAGGGCAAGACCCGTCTTGCCAAA
EST: TGAGATCGGAAAATTCACCTCTCCAACCCCCAATCCCATCGTTGCAAATG ATCCGATTCATTCTGTTGCAGAACAGGCAGGGCAAGACCCGTCTTGCCAAAEST: gi|151399436|gb|EV269307.1|EV269307
genomic: TGAGATCGGAAAATTCACCTCTCCAACCCCCAATCCCATCGTTGCAAATGgttcgttcat ... gcattcgcagATCCGATTCATTCTGTTGCAGAACAGGCAGGGCAAGACCCGTCTTGCCAAA
EST: TGAGATCGGAAAATTCACCTCTCCAACCCCCAATCCCATCGTTGCAAATG ATCCGATTCATTCTGTTGCAGAACAGGCAGGGCAAGACCCGTCTTGCCAAA
genomic: TGAGATCGGAAAATTCACCTCTCCAACCCCCAATCCCATCGTTGCAAATGgttcgttcat ... gcattcgcagATCCGATTCATTCTGTTGCAGAACAGGCAGGGCAAGACCCGTCTTGCCAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCGGTGGTATGATTCATCATTCTCTTTCAGTTTTTGGCATTGAAGAATCTGAGATCGGAAAATTCACCTCTCCAACCCCCAATCCCATCGTTGCAAATGgttcgttcataattctattccctctttcgttccattttttttttcatttttgaatgattgttttcccctttttccgcattcgcag
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