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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTGGTAGAAGAAATTGGGCGTGTGGGAGTTGTTGAATCGGGAAGCAAAAAAAATGAGAATCCATCACATAGCATGCCTCCAAGACAATTATTCCTATCTgtatgtagtatctaacattccttcattcaatttttctcttgattttgatgaatgaatcatctgagtggcgcag

Basic information

species Glycine max
transcript GLYMA14G36610.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209714894|gb|BW682059.1|BW682059
EST:     NNNNTGAGAATCCATCACATAGCATGCCTCCAAGACAATTATTCCTATCT                         GATCGTAGACGAGAGCACGAAGGAAGCCGCGGCGGTGGACCCGGTCGAACC
genomic: AAAATGAGAATCCATCACATAGCATGCCTCCAAGACAATTATTCCTATCTgtatgtagta ... agtggcgcagGATCGTAGACGAGAGCACGAAGGAAGCCGCGGCGGTGGACCCGGTCGAACC
EST: gi|10847409|gb|BF070096.1|BF070096
EST:     CACATAGCATGCCTCCAAGACAATTATTCCTATCT                         GATCGTAGACGAGAGCACGAAGGAAGCCGCGGCGGTGGACCCGGTCGAACC
genomic: CACATAGCATGCCTCCAAGACAATTATTCCTATCTgtatgtagta ... agtggcgcagGATCGTAGACGAGAGCACGAAGGAAGCCGCGGCGGTGGACCCGGTCGAACC
EST: gi|4283221|gb|AI440629.1|AI440629
EST:     TGAGAATCCATCACATAGCATGCCTCCAAGACAATTATTCCTATCT                         GATCGTAGACGAGAGCACGAAGGAAGCCGCGGCGGTGGACCCGGTCGAACC
genomic: TGAGAATCCATCACATAGCATGCCTCCAAGACAATTATTCCTATCTgtatgtagta ... agtggcgcagGATCGTAGACGAGAGCACGAAGGAAGCCGCGGCGGTGGACCCGGTCGAACC
EST: gi|27426743|gb|CA938263.1|CA938263
EST:     TGAGAATCCATCACATAGCATGCCTCCAAGACAATTATTCCTATCT                         GATCGTAGACGAGAGCACGAAGGAAGCCGCGGCGGTGGACCCGGTCGAACC
genomic: TGAGAATCCATCACATAGCATGCCTCCAAGACAATTATTCCTATCTgtatgtagta ... agtggcgcagGATCGTAGACGAGAGCACGAAGGAAGCCGCGGCGGTGGACCCGGTCGAACC
EST: gi|6567238|gb|AW234849.1|AW234849
EST:     NNNNTGAGAATCCATCACATAGCATGCCTCCAAGACAATTATTCCTATCT                         GATCGTAGACGAGAGCACGAAGGAAGCCGCGGCGGTGGACCCGGTCGAACC
genomic: AAAATGAGAATCCATCACATAGCATGCCTCCAAGACAATTATTCCTATCTgtatgtagta ... agtggcgcagGATCGTAGACGAGAGCACGAAGGAAGCCGCGGCGGTGGACCCGGTCGAACC
EST: gi|298171455|gb|HO016487.1|HO016487
EST:     NNNNTGAGAATCCATCACATAGCATGCCTCCAAGACAATTATTCCTATCT                         GATCGTAGACGAGAGCACGAAGGAAGCCGCGGCGGTGGACCCGGTCGAACC
genomic: AAAATGAGAATCCATCACATAGCATGCCTCCAAGACAATTATTCCTATCTgtatgtagta ... agtggcgcagGATCGTAGACGAGAGCACGAAGGAAGCCGCGGCGGTGGACCCGGTCGAACC
EST: gi|298196527|gb|HO041270.1|HO041270
EST:     NNNNTGAGAATCCATCACATAGCATGCCTCCAAGACAATTATT-CTATCT                         GATCGTAGACGAGAGCACGAAGGAAGCCGCGGCGGTGGACCCGGTCGAACC
genomic: AAAATGAGAATCCATCACATAGCATGCCTCCAAGACAATTATTCCTATCTgtatgtagta ... agtggcgcagGATCGTAGACGAGAGCACGAAGGAAGCCGCGGCGGTGGACCCGGTCGAACC
EST: gi|209706270|gb|BW676285.1|BW676285
EST:     NNNNTGAGAATCCATCACATAGCATGCCTCCAAGACAATTATTCCTATCT                         GATCGTAGACGAGAGCACGAAGGAAGCCGCGGCGGTGGACCCGGTCGAACC
genomic: AAAATGAGAATCCATCACATAGCATGCCTCCAAGACAATTATTCCTATCTgtatgtagta ... agtggcgcagGATCGTAGACGAGAGCACGAAGGAAGCCGCGGCGGTGGACCCGGTCGAACC