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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGGCCAATATGAAGACTCGTACCTCTAAGAAGATCTCTGCAAAATGGGTTCCAATTTTCTCTGTATCTTCCTTCCTTATTGGAATGCTCATAACAACCAGgtctctctatcttaatctcttaacattttctctttactctttttcttatatgattcatctcagttctggattcgtgttctgtgtactttccttttttagt...

Basic information

species Glycine max
transcript GLYMA14G33700.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208077849|gb|GD875255.1|GD875255
EST:     CCAATTTTCTCTGTATCTTCCTTCCTTATTGGAATGCTCATAACAACCAG                         GATGTGGGAACCACCAGAATCTAACGGGGTGTTACTGTCAAATCACCGACA
genomic: CCAATTTTCTCTGTATCTTCCTTCCTTATTGGAATGCTCATAACAACCAGgtctctctat ... tacttttcagGATGTGGGAACCACCAGAATCTAACGGGGTGTTACTGTCAAATCACCGACA
EST: gi|193682142|gb|FK622918.1|FK622918
EST:     CCAATTTTCTCTGTATCTTCCTTCCTTATTGGAATGCTCATAACAACCAG                         GATGTGGGAACCACCAGAATCTAACGGGGTGTTACCGTCAAATCACCGACA
genomic: CCAATTTTCTCTGTATCTTCCTTCCTTATTGGAATGCTCATAACAACCAGgtctctctat ... tacttttcagGATGTGGGAACCACCAGAATCTAACGGGGTGTTACTGTCAAATCACCGACA
EST: gi|193665829|gb|FK609690.1|FK609690
EST:     CCAATTTTCTCTGTATCTTCCTTCCTTATTGGAATGCTCATAACAACCAG                         GATGTGGGAACCACCAGAATCTAACGGGGTGTTACCGTCAAATCACCGACA
genomic: CCAATTTTCTCTGTATCTTCCTTCCTTATTGGAATGCTCATAACAACCAGgtctctctat ... tacttttcagGATGTGGGAACCACCAGAATCTAACGGGGTGTTACTGTCAAATCACCGACA