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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CACCCTATCTCCTCCTCCGCACACTGTCGTCTCGCACCAAACCTGTAACTGCACTGCTGAACCTGCAAACGAGTTGGGGTTCGTTACTATCACGATTAAGgtacgtattgcgttgctgatagttttagatttgagtgtgttctatttataaataactgagtgtggtgtgagtgtgttctatttataaataactgatcttg...

Basic information

species Glycine max
transcript GLYMA14G24450.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|27427504|gb|CA939024.1|CA939024
EST:     GCACTGCTGAACCTGCAAACGAGTTGGGGTTCGTTACTATCACGATTAAG                         TTATGGAGGAGCAATTCATACTTAGAGTTCCACCTAATGTGGCAGAGCGGA
genomic: GCACTGCTGAACCTGCAAACGAGTTGGGGTTCGTTACTATCACGATTAAGgtacgtattg ... atggttatagTTATGGAGGAGCAATTCATACTTAGAGTTCCACCTAATGTGGCAGAGCGGA
EST: gi|298186585|gb|HO037218.1|HO037218
EST:     GCACTGCTGAACCTGCAAACGAGTTGGGGTTCGTTACTATCACGATTAAG                         TTATGGAGGAGCAATTCATACTTAGAGTTCCACCTAATGTGGCAGAGCGGA
genomic: GCACTGCTGAACCTGCAAACGAGTTGGGGTTCGTTACTATCACGATTAAGgtacgtattg ... atggttatagTTATGGAGGAGCAATTCATACTTAGAGTTCCACCTAATGTGGCAGAGCGGA
EST: gi|298164140|gb|HO013785.1|HO013785
EST:     GCACTGCTGAACCTGCAAACGAGTTGGGGTTCGTTACTATCACGATTAAG                         TTATGGAGGAGCAATTCATACTTAGAGTTCCACCTAATGTGGCAGAGCGGA
genomic: GCACTGCTGAACCTGCAAACGAGTTGGGGTTCGTTACTATCACGATTAAGgtacgtattg ... atggttatagTTATGGAGGAGCAATTCATACTTAGAGTTCCACCTAATGTGGCAGAGCGGA
EST: gi|11275174|gb|BF325497.1|BF325497
EST:     GCACTGCTGAACCTGCAAACGAGTTGGGGTTCGTTACTATCACGATTAAG                         TTATGGAGGAGCAATTCATACTTAGAGTTCCACCTAATGTGGCAGAGCGGA
genomic: GCACTGCTGAACCTGCAAACGAGTTGGGGTTCGTTACTATCACGATTAAGgtacgtattg ... atggttatagTTATGGAGGAGCAATTCATACTTAGAGTTCCACCTAATGTGGCAGAGCGGA