1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CATTAAGTGTCACTTCTTCACCGCCATGAATGCCATAGCCACTGCTTCTGCTCTCACTCTTCCGATTTTTCTTAGAGCTGGAAAACTTGACACCAAAAGGgtaacctttgtttttgttcaacgtgtgctgttttgcacttaactaggtgcttttttttttaaaggtaatgttaaaagtgaagtttaatttagttatttaa...
species | Glycine max |
transcript | GLYMA14G23860.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTCTCACTCTTCCGATTTTTCTTAGAGCTGGAAAACTTGACACCAAAAGG GATTTGAAAGGTAGATTTAGAGTGTTTGCTGTATTTGGAGAAGAAGAGAAGEST: gi|209716515|gb|BW658951.1|BW658951
genomic: CTCTCACTCTTCCGATTTTTCTTAGAGCTGGAAAACTTGACACCAAAAGGgtaacctttg ... caaatttcagGATTTGAAAGGTAGATTTAGAGTGTTTGCTGTATTTGGAGAAGAAGAGAAG
EST: CTCTCACTCTTCCGATTTTTCTTAGAGCTGGAAAACTTGACACCAAAAGG GATTTGAAAGGTAGATTTAGAGTGTTTGCTGTATTTGGAGAAGAAGAGAAGEST: gi|209726908|gb|BW675335.1|BW675335
genomic: CTCTCACTCTTCCGATTTTTCTTAGAGCTGGAAAACTTGACACCAAAAGGgtaacctttg ... caaatttcagGATTTGAAAGGTAGATTTAGAGTGTTTGCTGTATTTGGAGAAGAAGAGAAG
EST: CTCTCACTCTTCCGATTTTTCTTAGAGCTGGAAAACTTGACACCAAAAGG GATTTGAAAGGTAGATTTAGAGTGTTTGCTGTATTTGGAGAAGAAGAGAAG
genomic: CTCTCACTCTTCCGATTTTTCTTAGAGCTGGAAAACTTGACACCAAAAGGgtaacctttg ... caaatttcagGATTTGAAAGGTAGATTTAGAGTGTTTGCTGTATTTGGAGAAGAAGAGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATTAAGTGTCACTTCTTCACCGCCATGAATGCCATAGCCACTGCTTCTGCTCTCACTCTTCCGATTTTTCTTAGAGCTGGAAAACTTGACACCAAAAGGgtaacctttgtttttgttcaacgtgtgctgttttgcacttaactaggtgcttttttttttaaaggtaatgttaaaagtgaagtttaatttagttatttaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA