Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGAAGAGGCCGCTCGCTCTCTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAGgttcagatctctcttctcagtttccgattttcctttttacttcgctttcaaccccctccttttcaatttccccaatcttttgaaatctttcttcgaaccctaaaaacatctgtccccgattttcgtttcccctttgcaagttcaccgtttaaatttaattaattttcttaattttcag

Basic information

species Glycine max
transcript GLYMA14G17930.4
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298170870|gb|HO015846.1|HO015846
EST:     GCTCGCTCTCTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAG                         GTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
genomic: GCTCGCTCTCTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAGgttcagatct ... taattttcagGTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
EST: gi|213589771|gb|DB969592.1|DB969592
EST:     CGCTCACTCTCTAGGGTTTTTATTTCTCTCTTCTCTCTGCATCGCTTCAG                         GTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
genomic: CGCTCGCTCTCTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAGgttcagatct ... taattttcagGTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
EST: gi|13790205|gb|BG652796.1|BG652796
EST:     CTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAG                         GTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
genomic: CTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAGgttcagatct ... taattttcagGTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
EST: gi|192324562|gb|FK016453.1|FK016453
EST:     CTCTTCTCACTGCATCGCTTCAG                         GTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
genomic: CTCTTCTCACTGCATCGCTTCAGgttcagatct ... taattttcagGTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
EST: gi|298179401|gb|HO027872.1|HO027872
EST:     CGCTCGCTCTCTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAG                         GTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
genomic: CGCTCGCTCTCTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAGgttcagatct ... taattttcagGTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
EST: gi|151395696|gb|EV265573.1|EV265573
EST:     CTCTTCTCACTGCATCGCTTCAG                         GTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
genomic: CTCTTCTCACTGCATCGCTTCAGgttcagatct ... taattttcagGTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
EST: gi|208108759|gb|GD907163.1|GD907163
EST:     GCTCTCTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAG                         GTTCTTCTGAAAAGATGTCTCGC
genomic: GCTCTCTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAGgttcagatct ... taattttcagGTTCTTCTGAAAAGATGTCTCGC
EST: gi|298185492|gb|HO030705.1|HO030705
EST:     CGCTCGCTCTCTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAG                         GTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
genomic: CGCTCGCTCTCTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAGgttcagatct ... taattttcagGTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
EST: gi|207702915|gb|GD686149.1|GD686149
EST:     GCTCGCTCTCTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAG                         GTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
genomic: GCTCGCTCTCTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAGgttcagatct ... taattttcagGTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
EST: gi|192299813|gb|FG993333.1|FG993333
EST:     TTTTTATTTCTCTCTTCTCTCTGCATCGCTTCAG                         GTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
genomic: TTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAGgttcagatct ... taattttcagGTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
EST: gi|192295485|gb|FG987099.1|FG987099
EST:     CTCTTCTCACTGCATCGCTTCAG                         GTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
genomic: CTCTTCTCACTGCATCGCTTCAGgttcagatct ... taattttcagGTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
EST: gi|8669525|gb|BE190632.1|BE190632
EST:     TCTCACTGCATCGCTTCAG                         GTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
genomic: TCTCACTGCATCGCTTCAGgttcagatct ... taattttcagGTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
EST: gi|209700148|gb|BW652992.1|BW652992
EST:     CTCTCTAGGGTTTTTATTTCTCTCTTCTCTCTGCATCGCTTCAG                         GTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
genomic: CTCTCTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAGgttcagatct ... taattttcagGTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
EST: gi|298198145|gb|HO039684.1|HO039684
EST:     GCTCGCTCTCTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAG                         GTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
genomic: GCTCGCTCTCTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAGgttcagatct ... taattttcagGTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
EST: gi|298164978|gb|HO011027.1|HO011027
EST:     GCTCGCTCTCTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAG                         GTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
genomic: GCTCGCTCTCTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAGgttcagatct ... taattttcagGTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
EST: gi|6070422|gb|AW099809.1|AW099809
EST:     CTGCATCGCTTCAG                         GTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
genomic: CTGCATCGCTTCAGgttcagatct ... taattttcagGTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
EST: gi|192300160|gb|FG989282.1|FG989282
EST:     CTCTTCTCACTGCATCGCTTCAG                         GTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
genomic: CTCTTCTCACTGCATCGCTTCAGgttcagatct ... taattttcagGTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
EST: gi|298178379|gb|HO024114.1|HO024114
EST:     GCTCGCTCTCTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAG                         GTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
genomic: GCTCGCTCTCTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAGgttcagatct ... taattttcagGTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
EST: gi|7591104|gb|AW706844.1|AW706844
EST:     TTTTTCTCTTCTCACTGCATCGCTTCAG                         GTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
genomic: TTTTTCTCTTCTCACTGCATCGCTTCAGgttcagatct ... taattttcagGTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
EST: gi|298179203|gb|HO027674.1|HO027674
EST:     CTCTCTAGGGTTTTTATTTCTCTCTTCTCTCTGCATCGCTTCAG                         GTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
genomic: CTCTCTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAGgttcagatct ... taattttcagGTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
EST: gi|298165150|gb|HO011199.1|HO011199
EST:     CGCTCGCTCTCTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAG                         GTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG
genomic: CGCTCGCTCTCTAGGGTTTTTCTTTTTCTCTTCTCACTGCATCGCTTCAGgttcagatct ... taattttcagGTTCTTCTGAAAAGATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAG