Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCGTAACAACCAAAATTTGTATGATTGTGTGGCTATCCAACAAAAAATAAAGCTTGCTTGTGATTATACTTTTCTTCTTAACAGTGTACACCATCACAAGgtattgctctctatttcatttttcgttcaagattcaaatagtcatttgtttgtgcccgtgggtaagaagtttgattgaactgttgttattggccaaacaatgag

Basic information

species Glycine max
transcript GLYMA14G13120.1
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA14G13120.1 (Glycine max), 5'ss of exon 1
lower sequence: Vv13s0019g03660.t01 (Vitis vinifera), 5'ss of exon 2
TCGTAACAACCAAAATTTGTATGATTGTGTGGCTATCCAACAAAAAATAAAGCTTGCTTGTGATTATACTTTTCTTCTTAACAGTGTACACCATCACAAGgtattgctctctatttcatttttcgttcaagattcaaatagtcatttgtttgtgcccgtgggtaagaagtttgattgaactgttgttattggccaaacaatgag--
||  || ||||      ||   ||        |||| ||||||||| ||||| ||||   |||||| |||| ||| ||||||||||| ||||||||||||||||||||||||      || ||   | ||  || |  |  |  |||  |  ||       | |  || |   |   ||||    | | |  || |    ||    
TCAGAAGAACCGTGGACTGCTGGACCTCTCATCTATTCAACAAAAATTAAAGGTTGCCCATGATTACACTTATCTGCTTAACAGTGTGCACCATCACAAGgtattgctctct------ttctttcctaaatttttatgttctgttttcatcttggtaacaagaagcaattggaagaaaacttggatcaattacctagttttgttgt