1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CCCAGAAAAAAATTAAAACTTTGCTTCTTCACTTTTTCTCTTACCCCTTCTGATCTCATGCAATTTCCCCTCATGGATCCCTTTGATTTGATTCGCAAAGgtataatttgtccttccatactttctataaatttcagatctttcacttacccatctcatttaattgtctgttcccccccctgtaattaccttcttttgtt...
species | Glycine max |
transcript | GLYMA14G12570.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TGATCTCATGCAATTTCCCCTCATGGATCCCTTTGATTTGATTCGCAAAG GGTTTGGCTGAAGCTATCTGGAATATTTCTGTTACAGTTTTTAAGGTCTATEST: gi|254330663|gb|GR841928.1|GR841928
genomic: TGATCTCATGCAATTTCCCCTCATGGATCCCTTTGATTTGATTCGCAAAGgtataatttg ... tattttgcagGGTTTGGCTGAAGCTATCTGGAATATTTCTGTTACAGTTTTTAAGGTCTAT
EST: TGATCTCATGCAATTTCCCCTCATGGATCCCTTTGATTTGATTCGCAAAG GGTTTGGCTGAAGCTATCTGGAATATTTCTGTTACAGTTTTTAAGGTCTAT
genomic: TGATCTCATGCAATTTCCCCTCATGGATCCCTTTGATTTGATTCGCAAAGgtataatttg ... tattttgcagGGTTTGGCTGAAGCTATCTGGAATATTTCTGTTACAGTTTTTAAGGTCTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCCAGAAAAAAATTAAAACTTTGCTTCTTCACTTTTTCTCTTACCCCTTCTGATCTCATGCAATTTCCCCTCATGGATCCCTTTGATTTGATTCGCAAAGgtataatttgtccttccatactttctataaatttcagatctttcacttacccatctcatttaattgtctgttcccccccctgtaattaccttcttttgtt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tccttcca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccccccc