1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
ACGGATGCAGCTGAAGACGCTACACGACGCCGTAATGCGGTGGCCGAGTACCGCAAGAAACTTCTTCAACACAAGGAATTGGAATCCAGAGTACGATCCGgttcgttcctttctcaatctcacttcccttccttctcatgctaaatagcgtctacatttcgctcttcttttcattccgagtactttttcttatcatcattattcccattgattagggttttgttgtgaattctgcgaattgcag
species | Glycine max |
transcript | GLYMA14G07750.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCGCAAGAAACTTCTTCAACACAAGGAATTGGAATCCAGAGTACGATCCG TCAGAGAAAATTTGCGTGCCTCGAAGAAAGAGTTCAACAAAACTGAAGATGEST: gi|24205449|gb|BU964702.1|BU964702
genomic: CCGCAAGAAACTTCTTCAACACAAGGAATTGGAATCCAGAGTACGATCCGgttcgttcct ... cgaattgcagTCAGAGAAAATTTGCGTGCCTCGAAGAAAGAGTTCAACAAAACTGAAGATG
EST: CCGCAAGAAACTTCTTCAACACAAGGAATTGGAATCCAGAGTACGATCCG TCAGAGAAAATTTGCGTGCCTCGAAGAAAGAGTTCAACAAAACTGAAGATGEST: gi|15813624|gb|BI785899.1|BI785899
genomic: CCGCAAGAAACTTCTTCAACACAAGGAATTGGAATCCAGAGTACGATCCGgttcgttcct ... cgaattgcagTCAGAGAAAATTTGCGTGCCTCGAAGAAAGAGTTCAACAAAACTGAAGATG
EST: CCGCAAGAAACTTCTTCAACACAAGGAATTGGAATCCAGAGTACGATCCG TCAGAGAAAATTTGCGTGCCTCGAAGAAAGAGTTCAACAAAACTGAAGATGEST: gi|208170286|gb|GD968821.1|GD968821
genomic: CCGCAAGAAACTTCTTCAACACAAGGAATTGGAATCCAGAGTACGATCCGgttcgttcct ... cgaattgcagTCAGAGAAAATTTGCGTGCCTCGAAGAAAGAGTTCAACAAAACTGAAGATG
EST: CCGCAAGAAACTTCTTCAACACAAGGAATTGGAATCCAGAGTACGATCCG TCAGAGAAAATTTGCGTGCCTCGAAGAAAGAGTTCAACAAAACTGAAGATGEST: gi|207798899|gb|GD771272.1|GD771272
genomic: CCGCAAGAAACTTCTTCAACACAAGGAATTGGAATCCAGAGTACGATCCGgttcgttcct ... cgaattgcagTCAGAGAAAATTTGCGTGCCTCGAAGAAAGAGTTCAACAAAACTGAAGATG
EST: CCGCAAGAAACTTCTTCAACACAAGGAATTGGAATCCAGAGTACGATCCG TCAGAGAAAATTTGCGTGCCTCGAAGAAAGAGTTCAACAAAACTGAAGATG
genomic: CCGCAAGAAACTTCTTCAACACAAGGAATTGGAATCCAGAGTACGATCCGgttcgttcct ... cgaattgcagTCAGAGAAAATTTGCGTGCCTCGAAGAAAGAGTTCAACAAAACTGAAGATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACGGATGCAGCTGAAGACGCTACACGACGCCGTAATGCGGTGGCCGAGTACCGCAAGAAACTTCTTCAACACAAGGAATTGGAATCCAGAGTACGATCCGgttcgttcctttctcaatctcacttcccttccttctcatgctaaatagcgtctacatttcgctcttcttttcattccgagtactttttcttatcatcattattcccattgattagggttttgttgtgaattctgcgaattgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA