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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCGGAACAGTATGCAGTTCAGTATCACATCACAATTCCTTCATATCTTCTCTCTTACCATCTTCATTATCATTACCTCTTCACTTTCACAATCCAGCCAGgttcacttctctatcttatcttcgttttcctacatattttaattatgcactaacaaaattttaatcagaataaatatgatttttaagttagttatagtaa...

Basic information

species Glycine max
transcript GLYMA14G04030.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209715707|gb|BW674369.1|BW674369
EST:     CTCTTACCATCTTCATTATCATTACCTCTTCACTTTCACAATCCAGCCAG                         TTTTGTGATGTGGGAACTGAAATTCCATCATCCAAGCTGTTGATCAAGGGT
genomic: CTCTTACCATCTTCATTATCATTACCTCTTCACTTTCACAATCCAGCCAGgttcacttct ... aatgatttagTTTTGTGATGCGGGAACTGAAATTCCATCATCCAAGCTGTTGATCAAGGGT
EST: gi|151410923|gb|EV280738.1|EV280738
EST:     CTCTTACCATCTTCATTATCATTACCTCTTCACTTTCACAATCCAGCCAG                         TTTTGTGATGCGGGAACTGAAATTCCATCATCCAAGCTGTTGATCAAGGGT
genomic: CTCTTACCATCTTCATTATCATTACCTCTTCACTTTCACAATCCAGCCAGgttcacttct ... aatgatttagTTTTGTGATGCGGGAACTGAAATTCCATCATCCAAGCTGTTGATCAAGGGT
EST: gi|151406081|gb|EV275896.1|EV275896
EST:     CTCTTACCATCTTCATTATCATTACCTCTTCACTTTCACAATCCAGCCAG                         TTTTGTGATGCGGGAACTGAAATTCCATCATCCAAGCTGTTGATCAAGGGT
genomic: CTCTTACCATCTTCATTATCATTACCTCTTCACTTTCACAATCCAGCCAGgttcacttct ... aatgatttagTTTTGTGATGCGGGAACTGAAATTCCATCATCCAAGCTGTTGATCAAGGGT
EST: gi|4396976|gb|AI495973.1|AI495973
EST:     CTCTTACCATCTTCATTATCATTACCTCTTCACTTTCACAATCCAGCCAG                         TTTTGTGATGCGGGAACTGAAATTCCATCATCCAAGCTGTTGATCAATGGT
genomic: CTCTTACCATCTTCATTATCATTACCTCTTCACTTTCACAATCCAGCCAGgttcacttct ... aatgatttagTTTTGTGATGCGGGAACTGAAATTCCATCATCCAAGCTGTTGATCAAGGGT