Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTAGCAGTGGAACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatgttaatggtttttgtgtttgatttagtttgcagagtgagtttgtggaatttaacatgtgaatgtgattatggttgaagcag

Basic information

species Glycine max
transcript GLYMA14G03380.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298180231|gb|HO025446.1|HO025446
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298178388|gb|HO024123.1|HO024123
EST:     AATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298176066|gb|HO015471.1|HO015471
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|18690771|gb|BM519619.1|BM519619
EST:     AAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298186560|gb|HO037193.1|HO037193
EST:     ACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATAAG
genomic: ACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|193499837|gb|FK464754.1|FK464754
EST:     CGGCGGGGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: CGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|193334219|gb|FK299213.1|FK299213
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298173141|gb|HO020125.1|HO020125
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|14259659|gb|BG882567.1|BG882567
EST:     CAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: CAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298186019|gb|HO031180.1|HO031180
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298176384|gb|HO023085.1|HO023085
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298178730|gb|HO024465.1|HO024465
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298193450|gb|HO033884.1|HO033884
EST:     CGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCACTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: CGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298185614|gb|HO030827.1|HO030827
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|192319176|gb|FK009116.1|FK009116
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|14259368|gb|BG882276.1|BG882276
EST:     GTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: GTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|193442335|gb|FK407334.1|FK407334
EST:     CGGCGGGGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: CGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|19053812|gb|BM732479.1|BM732479
EST:     CGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: CGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298190320|gb|HO032441.1|HO032441
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298174887|gb|HO014804.1|HO014804
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|208182844|gb|GD986946.1|GD986946
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|193482719|gb|FK444010.1|FK444010
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|151404556|gb|EV274370.1|EV274370
EST:     GGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: GGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298190823|gb|HO032944.1|HO032944
EST:     AACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|213606515|gb|DB958997.1|DB958997
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298167185|gb|HO010624.1|HO010624
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298179498|gb|HO027969.1|HO027969
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|208040782|gb|GD839887.1|GD839887
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|193649046|gb|FK597513.1|FK597513
EST:     GCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: GCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|213606584|gb|DB972519.1|DB972519
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|16343137|gb|BI968732.1|BI968732
EST:     GGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: GGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|193700425|gb|FK635054.1|FK635054
EST:     GATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: GATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|213593001|gb|DB969855.1|DB969855
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298184153|gb|HO029366.1|HO029366
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|193664142|gb|FK608750.1|FK608750
EST:     CGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: CGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|208185248|gb|GD981608.1|GD981608
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298179381|gb|HO027852.1|HO027852
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298166773|gb|HO010212.1|HO010212
EST:     AACAGCAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|20815207|gb|BQ299685.1|BQ299685
EST:     CGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: CGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|151407956|gb|EV277771.1|EV277771
EST:     GGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: GGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298194938|gb|HO043410.1|HO043410
EST:     GCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: GCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|192311868|gb|FK004513.1|FK004513
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|192311867|gb|FK004512.1|FK004512
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298191318|gb|HO038797.1|HO038797
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298180711|gb|HO022150.1|HO022150
EST:     GCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: GCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|193619369|gb|FK571237.1|FK571237
EST:     GATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: GATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298199015|gb|HO042378.1|HO042378
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298183906|gb|HO029119.1|HO029119
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|207758863|gb|GD732186.1|GD732186
EST:     AACTAGTTTGTCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AAC-AG-TTG-CGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|207786059|gb|GD756184.1|GD756184
EST:     GGCGGGGATGGTTGCCATGAGG                         T
genomic: GGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcag-
EST: gi|207786059|gb|GD756184.1|GD756184
EST:     GGCGGGGATGGTTGCCATGAGG                         T
genomic: GGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcag-
EST: gi|19053708|gb|BM732375.1|BM732375
EST:     GTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: GTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|298188212|gb|HO034905.1|HO034905
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGGAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
EST: gi|12691345|gb|BG157681.1|BG157681
EST:     GTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAAGGGACTCTTCCTACCGAATCCGATG
genomic: GTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGG-AAGGG-CTCTTCCTACCGAATCCGATG
EST: gi|298165598|gb|HO011647.1|HO011647
EST:     AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGG                         TTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG
genomic: AACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatg ... gttgaagcagTTTCACCAGTACCAGGTGGTGGGAAGGGCTCTTCCTACCGAATCCGATGAG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GTAGCAGTGGAACAACAGTTGCGGAGTCAATCGAAATCGGCGGAGATGGTTGCCATGAGGgtgggtaatgttaatggtttttgtgtttgatttagtttgcagagtgagtttgtggaatttaacatgtgaatgtgattatggttgaagcag

- - - - - - - - - - - - - - - - - - - -  GGAGAT
- - - - - - - - - - - - - - - - - - - - - GAGATG