1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
ATTGGCACCAAAAATAGGTCGCAGTCCAGTTATCGTTACTCCTAAAGCAGTTTCTGATTCCCAAAACTCACAAACGTGCCTTGATCCCGATGCTAGCAGAgttcgtttacctcctttcttcattttttttttttgtctctgtctttgttccattgttacaacataaaattagtgagaaatttcaaatccccaatcatatg...
species | Glycine max |
transcript | GLYMA14G01290.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TTTCTGATTCCCAAAACTCACAAACGTGCCTTGATCCCGATGCTAGCAGA AGTGTGCTTGGCATTATACTTGGAGGTGGTGCTGGGACTCGGCTTTATCCAEST: gi|10844760|gb|BF067973.1|BF067973
genomic: TTTCTGATTCCCAAAACTCACAAACGTGCCTTGATCCCGATGCTAGCAGAgttcgtttac ... atgtttatagAGTGTGCTTGGCATTATACTTGGAGGTGGTGCTGGGACTCGGCTTTATCCA
EST: TTTCTGATTCCCAAAACTCACAAACGTGCCTTGATCCCGATGCTAGCAGA AGTGTGCTTGGCATTATACTTGGAGGTGGTGCTGGGACTCGGCTTTATCCAEST: gi|193679481|gb|FK621483.1|FK621483
genomic: TTTCTGATTCCCAAAACTCACAAACGTGCCTTGATCCCGATGCTAGCAGAgttcgtttac ... atgtttatagAGTGTGCTTGGCATTATACTTGGAGGTGGTGCTGGGACTCGGCTTTATCCA
EST: TTTCTGATTCCCAAAACTCACAAACGTGCCTTGATCCCGATGCTAGCAGA AGTGTGCTTGGCATTATACTTGGAGGTGGTGCTGGGACTCGGCTTTATCCAEST: gi|120532534|gb|EH260667.1|EH260667
genomic: TTTCTGATTCCCAAAACTCACAAACGTGCCTTGATCCCGATGCTAGCAGAgttcgtttac ... atgtttatagAGTGTGCTTGGCATTATACTTGGAGGTGGTGCTGGGACTCGGCTTTATCCA
EST: TTTCTGATTCCCAAAACTCACAAACGTGCCTTGATCCCGATGCTAGCAGA AGTGTGCTTGGCATTATACTTGGAGGTGGTGCTGGGACTCGGCTTTATCCAEST: gi|17022405|gb|BM093439.1|BM093439
genomic: TTTCTGATTCCCAAAACTCACAAACGTGCCTTGATCCCGATGCTAGCAGAgttcgtttac ... atgtttatagAGTGTGCTTGGCATTATACTTGGAGGTGGTGCTGGGACTCGGCTTTATCCA
EST: TTTCTGATTCCCAAAACTCACAAACGTGCCTTGATCCCGATGCTAGCAGA AGTGTGCTTGGCATTATACTTGGAGGTGGTGCTGGGACTCGGCTTTATCCAEST: gi|9820051|gb|BE555564.1|BE555564
genomic: TTTCTGATTCCCAAAACTCACAAACGTGCCTTGATCCCGATGCTAGCAGAgttcgtttac ... atgtttatagAGTGTGCTTGGCATTATACTTGGAGGTGGTGCTGGGACTCGGCTTTATCCA
EST: TTTCTGATTCCCAAAACTCACAAACGTGCCTTGATCCCGATGCTAGCAGA AGTGTGCTTGGCATTATACTTGGAGGTGGTGCTGGGACTCGGCTTTATCCAEST: gi|7796534|gb|AW781931.1|AW781931
genomic: TTTCTGATTCCCAAAACTCACAAACGTGCCTTGATCCCGATGCTAGCAGAgttcgtttac ... atgtttatagAGTGTGCTTGGCATTATACTTGGAGGTGGTGCTGGGACTCGGCTTTATCCA
EST: TTTCTGATTCCCAAAACTCACAAACGTGCCTTGATCCCGATGCTAGCAGA AGTGTGCTTGGCATTATACTTGGAGGTGGTGCTGGGACTCGGCTTTATCCAEST: gi|209712745|gb|BW681599.1|BW681599
genomic: TTTCTGATTCCCAAAACTCACAAACGTGCCTTGATCCCGATGCTAGCAGAgttcgtttac ... atgtttatagAGTGTGCTTGGCATTATACTTGGAGGTGGTGCTGGGACTCGGCTTTATCCA
EST: TTTCTGATTCCCAAAACTCACAAACGTGCCTTGATCCCGATGCTAGCAGA AGTGTGCTTGGCATTATACTTGGAGGTGGTGCTGGGACTCGGCTTTATCCAEST: gi|17400675|gb|BM177457.1|BM177457
genomic: TTTCTGATTCCCAAAACTCACAAACGTGCCTTGATCCCGATGCTAGCAGAgttcgtttac ... atgtttatagAGTGTGCTTGGCATTATACTTGGAGGTGGTGCTGGGACTCGGCTTTATCCA
EST: TTTCTGATTCCCAAAACTCACAAACGTGCCTTGATCCCGATGCTAGCAGA AGTGTGCTTGGCATTATACTTGGAGGTGGTGCTGGGACTCGGCTTTATCCAEST: gi|23728291|gb|BU762193.1|BU762193
genomic: TTTCTGATTCCCAAAACTCACAAACGTGCCTTGATCCCGATGCTAGCAGAgttcgtttac ... atgtttatagAGTGTGCTTGGCATTATACTTGGAGGTGGTGCTGGGACTCGGCTTTATCCA
EST: TTTCTGATTCCCAAAACTCACAAACGTGCCTTGATCCCGATGCTAGCAGA AGTGTGCTTGGCATTATACTTGGAGGTGGTGCTGGGACTCGGCTTTATCCA
genomic: TTTCTGATTCCCAAAACTCACAAACGTGCCTTGATCCCGATGCTAGCAGAgttcgtttac ... atgtttatagAGTGTGCTTGGCATTATACTTGGAGGTGGTGCTGGGACTCGGCTTTATCCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTGGCACCAAAAATAGGTCGCAGTCCAGTTATCGTTACTCCTAAAGCAGTTTCTGATTCCCAAAACTCACAAACGTGCCTTGATCCCGATGCTAGCAGAgttcgtttacctcctttcttcattttttttttttgtctctgtctttgttccattgttacaacataaaattagtgagaaatttcaaatccccaatcatatg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cctcctt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tccccaa