1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTACTCTGTCATCTCTATCTGCCACCAAGCTAGGCTCTATAGCTATTGAAGgtaactatggaagcctatgtcagtgctaattacattccatttgaaacttatttgtgtttacatatttttcgttcatctgcag
species | Glycine max |
transcript | GLYMA14G00760.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCAAGCTAGGCTCTATAGCTATTGAAG CTGCTCTTAAAAGGGCCAATGTTGATCCATCCCTTGTGGAAGAAGTATTTTEST: gi|192329988|gb|FK021574.1|FK021574
genomic: CCAAGCTAGGCTCTATAGCTATTGAAGgtaactatgg ... tcatctgcagCTGCTCTTAAAAGGGCCAATGTTGATCCATCCCTTGTGGAAGAAGTATTTT
EST: CAAGCTAGGCTCTATAGCTATTGAAG CTGCTCTTAAAAGGGCCAATGTTGATCCATCCCTTGTGGAAGAAGTATTTTEST: gi|37993878|gb|CF805624.1|CF805624
genomic: CAAGCTAGGCTCTATAGCTATTGAAGgtaactatgg ... tcatctgcagCTGCTCTTAAAAGGGCCAATGTTGATCCATCCCTTGTGGAAGAAGTATTTT
EST: TACTCTGTCATCTCTATCTGCCACCAAGCTAGGCTCTATAGCTATTGAAG CTGCTCTTAAAAGGGCCAATGTTGATCCATCCCTTGTGGAAGAAGTATTTT
genomic: TACTCTGTCATCTCTATCTGCCACCAAGCTAGGCTCTATAGCTATTGAAGgtaactatgg ... tcatctgcagCTGCTCTTAAAAGGGCCAATGTTGATCCATCCCTTGTGGAAGAAGTATTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTACTCTGTCATCTCTATCTGCCACCAAGCTAGGCTCTATAGCTATTGAAGgtaactatggaagcctatgtcagtgctaattacattccatttgaaacttatttgtgtttacatatttttcgttcatctgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG