1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ACCAGGAATTTATTTGGCAGTCATGGATTATTCATCATGGATGATTAACACTTCCTTGGATCTCAACATTAATCCCCACAGGCTTCATGAAGAACTTCCCgtaagtataaacatattgggcggaagatcttctgtgaaatgtttccctcagaataataattctttcttcttttcttcttgtgtgttcatttcag
species | Glycine max |
transcript | GLYMA13G44730.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTTCCTTGGATCTCAACATTAATCCCCACAGGCTTCATGAAGAACTTCCC AAAAAGGAGGTGGAAAACAACTTTTTGTCATTGAATTTGGAGGTGAAGAAAEST: gi|7234833|gb|AW570166.1|AW570166
genomic: CTTCCTTGGATCTCAACATTAATCCCCACAGGCTTCATGAAGAACTTCCCgtaagtataa ... ttcatttcagAAAAAGGAGGTGGAAAACAACTTTTTGTCATTGAATTTGGAGGTGAAGAAA
EST: TAATCCCCACAGGCTTCATGAAGAACTTCCC AAAAAGGAGGTGGAAAACAACTTTTTGTCATTGAATTTGGAGGTGAAGAAAEST: gi|209728203|gb|BW651638.1|BW651638
genomic: TAATCCCCACAGGCTTCATGAAGAACTTCCCgtaagtataa ... ttcatttcagAAAAAGGAGGTGGAAAACAACTTTTTGTCATTGAATTTGGAGGTGAAGAAA
EST: CTTCCTTGGATCTCAACATTAATCCCCACAGGCTTCATGAAGAACTTCCC AAAAAGGAGGTGGAAAACAACTTTTTGTCATTGAATTTGGAGGTGAAGAAAEST: gi|209710064|gb|BW653545.1|BW653545
genomic: CTTCCTTGGATCTCAACATTAATCCCCACAGGCTTCATGAAGAACTTCCCgtaagtataa ... ttcatttcagAAAAAGGAGGTGGAAAACAACTTTTTGTCATTGAATTTGGAGGTGAAGAAA
EST: CTTCCTTGGATCTCAACATTAATCCCCACAGGCTTCATGAAGAACTTCCC AAAAAGGAGGTGGAAAACAACTTTTTGTCATTGAATTTGGAGGTGAAGAAA
genomic: CTTCCTTGGATCTCAACATTAATCCCCACAGGCTTCATGAAGAACTTCCCgtaagtataa ... ttcatttcagAAAAAGGAGGTGGAAAACAACTTTTTGTCATTGAATTTGGAGGTGAAGAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCAGGAATTTATTTGGCAGTCATGGATTATTCATCATGGATGATTAACACTTCCTTGGATCTCAACATTAATCCCCACAGGCTTCATGAAGAACTTCCCgtaagtataaacatattgggcggaagatcttctgtgaaatgtttccctcagaataataattctttcttcttttcttcttgtgtgttcatttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC