1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CGCCACCAAACCAACTTGGCCAAACGTGCAGCTCGCGAGGCCAAGGACTCCCCCGCGCAGCCCCAACCTCACAAACGCAAAGTCACTCTTCGAAAAACAGgtttcattctattcactaactcaatttcgtcttttatgaaaaacaataaatataaatttatgtgcttgcag
species | Glycine max |
transcript | GLYMA13G44430.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCCCGCGCAGCCCCAACCTCACAAACGCAAAGTCACTCTTCGAAAAACAG TGAAGATTGGACGACCTGGGTACCGTGTCACCAAGCAGTATGACCCGGAGAEST: gi|213611389|gb|DB972762.1|DB972762
genomic: CCCCGCGCAGCCCCAACCTCACAAACGCAAAGTCACTCTTCGAAAAACAGgtttcattct ... gtgcttgcagTGAAGATTGGACGACCTGGGTACCGTGTCACCAAGCAGTATGACCCGGAGA
EST: CCCCGCGCAGCCCCAACCTCACAAACGCAAAGTCACTCTTCGAAAAACAG TGAAGATTGGACGACCTGGGTACCGTGTCACCAAGCAGTATGACCCGGAGAEST: gi|24205772|gb|BU965025.1|BU965025
genomic: CCCCGCGCAGCCCCAACCTCACAAACGCAAAGTCACTCTTCGAAAAACAGgtttcattct ... gtgcttgcagTGAAGATTGGACGACCTGGGTACCGTGTCACCAAGCAGTATGACCCGGAGA
EST: CCCCGCGCAGCCCCAACCTCACAAACGCAAAGTCACTCTTCGAAAAACAG TGAAGATTGGACGACCTGGGTACCGTGTCACCAAGCAGTATGACCCGGAGAEST: gi|19270221|gb|BM886477.1|BM886477
genomic: CCCCGCGCAGCCCCAACCTCACAAACGCAAAGTCACTCTTCGAAAAACAGgtttcattct ... gtgcttgcagTGAAGATTGGACGACCTGGGTACCGTGTCACCAAGCAGTATGACCCGGAGA
EST: CCCCGCGCAGCCCCAACCTCACAAACGCAAAGTCACTCTTCGAAAAACAG TGAAGATTGGACGACCTGGGTACCGTGTCACCAAGCAGTATGACCCGGAGAEST: gi|213611714|gb|DB960642.1|DB960642
genomic: CCCCGCGCAGCCCCAACCTCACAAACGCAAAGTCACTCTTCGAAAAACAGgtttcattct ... gtgcttgcagTGAAGATTGGACGACCTGGGTACCGTGTCACCAAGCAGTATGACCCGGAGA
EST: CCCCGCGCAGCCCCAACCTCACAAACGCAAAGTCACTCTTCGAAAAACAG TGAAGATTGGACGACCTGGGTACCGTGTCACCAAGCAGTATGACCCGGAGAEST: gi|6069618|gb|AW099277.1|AW099277
genomic: CCCCGCGCAGCCCCAACCTCACAAACGCAAAGTCACTCTTCGAAAAACAGgtttcattct ... gtgcttgcagTGAAGATTGGACGACCTGGGTACCGTGTCACCAAGCAGTATGACCCGGAGA
EST: CCCCGCGCAGCCCCAACCTCACAAACGCAAAGTCACTCTTCGAAAAACAG TGAAGATTGGACGACCTGGGTACCGTGTCACCAAGCAGTATGACCCGGAGAEST: gi|213595326|gb|DB966506.1|DB966506
genomic: CCCCGCGCAGCCCCAACCTCACAAACGCAAAGTCACTCTTCGAAAAACAGgtttcattct ... gtgcttgcagTGAAGATTGGACGACCTGGGTACCGTGTCACCAAGCAGTATGACCCGGAGA
EST: CCCCGCGCAGCCCCAACCTCACAAACGCAAAGTCACTCTTCGAAAAACAG TGAAGATTGGACGACCTGGGTACCGTGTCACCAAGCAGTATGACCCGGAGA
genomic: CCCCGCGCAGCCCCAACCTCACAAACGCAAAGTCACTCTTCGAAAAACAGgtttcattct ... gtgcttgcagTGAAGATTGGACGACCTGGGTACCGTGTCACCAAGCAGTATGACCCGGAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGCCACCAAACCAACTTGGCCAAACGTGCAGCTCGCGAGGCCAAGGACTCCCCCGCGCAGCCCCAACCTCACAAACGCAAAGTCACTCTTCGAAAAACAGgtttcattctattcactaactcaatttcgtcttttatgaaaaacaataaatataaatttatgtgcttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG