1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CTTTGCTACTGTATCAAATGATCCTGACACACATGATGACTTCAAGCCAGCTAATAAACTTGAGAATTCCAACATTTCTTTGGCTGATGTTATTGAGCAGgtgcattgcatgtcgattgaatcttatgcatgaaaaaaatatcgattatttcttgctttaaggatatacttgaagttgaactgttgttcagtgtggttaatgtgtgcag
species | Glycine max |
transcript | GLYMA13G44000.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTAATAAACTTGAGAATTCCAACATTTCTTTGGCTGATGTTATTGAGCAG GATGTCAAGGATAATCCTGTTATGATTTACATGAAAGGTGTGCCTGATTTTEST: gi|151403951|gb|EV273761.1|EV273761
genomic: CTAATAAACTTGAGAATTCCAACATTTCTTTGGCTGATGTTATTGAGCAGgtgcattgca ... atgtgtgcagGATGTCAAGGATAATCCTGTTATGATTTACATGAAAGGTGTGCCTGATTTT
EST: CTAATAAACTTGAGAATTCCAACATTTCTTTGGCTGATGTTATTGAGCAG GATGTCAAGGATAATCCTGTTATGATTTACATGAAAGGTGTGCCTGATTTTEST: gi|58018776|gb|CX705518.1|CX705518
genomic: CTAATAAACTTGAGAATTCCAACATTTCTTTGGCTGATGTTATTGAGCAGgtgcattgca ... atgtgtgcagGATGTCAAGGATAATCCTGTTATGATTTACATGAAAGGTGTGCCTGATTTT
EST: CTAATAAACTTGAGAATTCCAACATTTCTTTGGCTGATGTTATTGAGCAG GATGTCAAGGATAATCCTGTTATGATTTACATGAAAGGTGTGCCTGATTTTEST: gi|193689192|gb|FK631403.1|FK631403
genomic: CTAATAAACTTGAGAATTCCAACATTTCTTTGGCTGATGTTATTGAGCAGgtgcattgca ... atgtgtgcagGATGTCAAGGATAATCCTGTTATGATTTACATGAAAGGTGTGCCTGATTTT
EST: GGCTGATGTTATTGAGCAG GATGTCAAGGATAATCCTGTTATGATTTACATGAAAGGTGTGCCTGATTTTEST: gi|31462442|gb|CD404470.1|CD404470
genomic: GGCTGATGTTATTGAGCAGgtgcattgca ... atgtgtgcagGATGTCAAGGATAATCCTGTTATGATTTACATGAAAGGTGTGCCTGATTTT
EST: CTAATAAACTTGAGAATTCCAACATTTCTTTGGCTGATGTTATTGAGCAG GATGTCAAGGATAATCCTGTTATGATTTACATGAAAGGTGTGCCTGATTTTEST: gi|193377474|gb|FK341054.1|FK341054
genomic: CTAATAAACTTGAGAATTCCAACATTTCTTTGGCTGATGTTATTGAGCAGgtgcattgca ... atgtgtgcagGATGTCAAGGATAATCCTGTTATGATTTACATGAAAGGTGTGCCTGATTTT
EST: CTAATAAACTTGAGAATTCCAACATTTCTTTGGCTGATGTTATTGAGCAG GATGTCAAGGATAATCCTGTTATGATTTACAEST: gi|208216921|gb|GE011215.1|GE011215
genomic: CTAATAAACTTGAGAATTCCAACATTTCTTTGGCTGATGTTATTGAGCAGgtgcattgca ... atgtgtgcagGATGTCAAGGATAATCCTGTTATGATTTACA
EST: CTAATAAACTTGAGAATTCCAACATTTCTTTGGCTGATGTTATTGAGCAG GATGTCAAGGATAATCCTGTTATGATTTACATGAAAGGTGTGCCTGATTTT
genomic: CTAATAAACTTGAGAATTCCAACATTTCTTTGGCTGATGTTATTGAGCAGgtgcattgca ... atgtgtgcagGATGTCAAGGATAATCCTGTTATGATTTACATGAAAGGTGTGCCTGATTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTTGCTACTGTATCAAATGATCCTGACACACATGATGACTTCAAGCCAGCTAATAAACTTGAGAATTCCAACATTTCTTTGGCTGATGTTATTGAGCAGgtgcattgcatgtcgattgaatcttatgcatgaaaaaaatatcgattatttcttgctttaaggatatacttgaagttgaactgttgttcagtgtggttaatgtgtgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG