1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GATGAGGTCGTGGCAGCTCCGGCGGGTCCGCCGCACCCTCTGGAGTGGAAATTTTCGCAGGTCTTCGGAGAACGCACGGCAGGGGAAGAGGTTCAGGAAGgtaattgccctacctcgtatgcgtgcgtgggaaaagaggccatgcttttcgtgtctctgtcggatccaatttctggtttgggattagggtttgattcgat...
species | Glycine max |
transcript | GLYMA13G42800.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ATTTTCGCAGGTCTTCGGAGAACGCACGGCAGGGGAAGAGGTTCAGGAAG TGGACATAATTTCAGCTATTGAATTTGACAAGTCCGGTGATCATCTTGCTAEST: gi|15286432|gb|BI470323.1|BI470323
genomic: ATTTTCGCAGGTCTTCGGAGAACGCACGGCAGGGGAAGAGGTTCAGGAAGgtaattgccc ... ctttctacagTGGACATAATTTCAGCTATTGAATTTGACAAGTCCGGTGATCATCTTGCTA
EST: ATTTTCGCAGGTCTTCGGAGAACGCACGGCAGGGGAAGAGGTTCAGGAAG TGGACATAATTTCAGCTATTGAATTTGACAAGTCCGGTGATCATCTTGCTAEST: gi|193333352|gb|FK300385.1|FK300385
genomic: ATTTTCGCAGGTCTTCGGAGAACGCACGGCAGGGGAAGAGGTTCAGGAAGgtaattgccc ... ctttctacagTGGACATAATTTCAGCTATTGAATTTGACAAGTCCGGTGATCATCTTGCTA
EST: CTTCGGAGAACGCACGGCAGGGGAAGAGGTTCAGGAAG TGGACATAATTTCAGCTATTGAATTTGACAAGTCCGGTGATCATCTTGCTAEST: gi|213605094|gb|DB956399.1|DB956399
genomic: CTTCGGAGAACGCACGGCAGGGGAAGAGGTTCAGGAAGgtaattgccc ... ctttctacagTGGACATAATTTCAGCTATTGAATTTGACAAGTCCGGTGATCATCTTGCTA
EST: ATTTTCGCAGGTCTTCGGAGAACGCACGGCAGGGGAAGAGGTTCAGGAAG TGGACATAATTTCAGCTATTGAATTTGACAAGTCCGGTGATCATCTTGCTAEST: gi|193609154|gb|FK563908.1|FK563908
genomic: ATTTTCGCAGGTCTTCGGAGAACGCACGGCAGGGGAAGAGGTTCAGGAAGgtaattgccc ... ctttctacagTGGACATAATTTCAGCTATTGAATTTGACAAGTCCGGTGATCATCTTGCTA
EST: ATTTTCGCAGGTCTTCGGAGAACGCACGGCAGGGGAAGAGGTTCAGGAAG TGGACATAATTTCAGCTATTGAATTTGACAAGTCCGGTGATCATCTTGCTAEST: gi|209700206|gb|BW656297.1|BW656297
genomic: ATTTTCGCAGGTCTTCGGAGAACGCACGGCAGGGGAAGAGGTTCAGGAAGgtaattgccc ... ctttctacagTGGACATAATTTCAGCTATTGAATTTGACAAGTCCGGTGATCATCTTGCTA
EST: ATTTTCGCAGGTCTTCGGAGAACGCACGGCAGGGGAAGAGGTTCAGGAAG TGGACATAATTTCAGCTATTGAATTTGACAAGTCCGGTGATCATCTTGCTAEST: gi|213614308|gb|DB958612.1|DB958612
genomic: ATTTTCGCAGGTCTTCGGAGAACGCACGGCAGGGGAAGAGGTTCAGGAAGgtaattgccc ... ctttctacagTGGACATAATTTCAGCTATTGAATTTGACAAGTCCGGTGATCATCTTGCTA
EST: ATTTTCGCAGGTCTTCGGAGAACGCACGGCAGGGGAAGAGGTTCAGGAAG TGGACATAATTTCAGCTATTGAATTTGACAAGTCCGGTGATCATCTTGCTA
genomic: ATTTTCGCAGGTCTTCGGAGAACGCACGGCAGGGGAAGAGGTTCAGGAAGgtaattgccc ... ctttctacagTGGACATAATTTCAGCTATTGAATTTGACAAGTCCGGTGATCATCTTGCTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGAGGTCGTGGCAGCTCCGGCGGGTCCGCCGCACCCTCTGGAGTGGAAATTTTCGCAGGTCTTCGGAGAACGCACGGCAGGGGAAGAGGTTCAGGAAGgtaattgccctacctcgtatgcgtgcgtgggaaaagaggccatgcttttcgtgtctctgtcggatccaatttctggtttgggattagggtttgattcgat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccctacc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggaaaaga