Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|208231960|gb|GE032749.1|GE032749EST: CGCCGGGGTTGATCTCTACAAGTTCGATCCATGGGAGCTACCCG CTAAGGCCGCGTTTGGGGAGCAGGAGTGGTATTTCTTTACACCGAGGGACA
genomic: CGCCGAGGTTGATCTCTACAAGTTCGATCCATGGGAGCTACCCGgtatgttctt ... tggttggcagCTAAGGCCGCGTTTGGGGAGCAGGAGTGGTATTTCTTTACTCCGAGGGACA
EST:
gi|208261341|gb|GE058249.1|GE058249EST: TTCGATCCATGGGAGCTACCCG CTGAGGCCGCGTTTGGGGAGCAGGAGTGGTATTTCTTTACACCGAGGGACA
genomic: TTCGATCCATGGGAGCTACCCGgtatgttctt ... tggttggcagCTAAGGCCGCGTTTGGGGAGCAGGAGTGGTATTTCTTTACTCCGAGGGACA
EST:
gi|208201410|gb|GD999651.1|GD999651EST: TACAAGTTCGATCCATGGGAGCTACCCG CTAAGGCCGCGTTTGGGGAGCAGGAGTGGTATTTCTTTACACCGAGGGACA
genomic: TACAAGTTCGATCCATGGGAGCTACCCGgtatgttctt ... tggttggcagCTAAGGCCGCGTTTGGGGAGCAGGAGTGGTATTTCTTTACTCCGAGGGACA
EST:
gi|193663564|gb|FK604590.1|FK604590EST: CATAATCGCCGAGGTTGATCTCTACAAGTTCGATCCATGGGAGCTACCCG CTAAGGCCGCGTTTGGGGAGCAGGAGTGGTATTTCTTTACACCGAGGGACA
genomic: CATCATCGCCGAGGTTGATCTCTACAAGTTCGATCCATGGGAGCTACCCGgtatgttctt ... tggttggcagCTAAGGCCGCGTTTGGGGAGCAGGAGTGGTATTTCTTTACTCCGAGGGACA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GTAGTTCACTACCTCAAGAAAAAAGCAGCTTCTGCTCCTCTTCCGGTAGCCATCATCGCCGAGGTTGATCTCTACAAGTTCGATCCATGGGAGCTACCCGgtatgttcttcaatttcatccaacgaatcaaaagattcaaactttacgttcaaaactcaaatgggtttgttttactttttattttgtattatttactttttgtatttattatgatttttctttatttttgtgtggttggcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT