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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCATGGATCGAATCCTGAAAGCGGCGAGAGCCTCTGGTTCTCTCAACCTCTCCAATCGCTCCCTCACgtaagccataccaactctctccactgttccatttgtttctacgacgtcgttttcttcttccttttgtttccattcatttgcgcattattttcgtttttctttcgatttgcag

Basic information

species Glycine max
transcript GLYMA13G35440.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|13481996|gb|BG511339.1|BG511339
EST:     AAAGCGGCGAGAGCCTCTGGTTCTCTCAACCTCTCCAATCGCTCCCTCAC                         AGAAATTCCCGACGAGGTTTACCGGAATCTGGAGGGGCTCGGCGGCGACGA
genomic: AAAGCGGCGAGAGCCTCTGGTTCTCTCAACCTCTCCAATCGCTCCCTCACgtaagccata ... cgatttgcagAGAAATTCCCGACGAGGTTTACCGGAATCTGGAGGGGCTCGGCGGCGACGA
EST: gi|208089640|gb|GD886201.1|GD886201
EST:     CTGGTTCTCTCAACCTCTCCAATCGCTCCCTCAC                         AGAAATTCCCGACGAGGTTTACCGGAATCTGGAGGGGCTCGGCGGCGACAA
genomic: CTGGTTCTCTCAACCTCTCCAATCGCTCCCTCACgtaagccata ... cgatttgcagAGAAATTCCCGACGAGGTTTACCGGAATCTGGAGGGGCTCGGCGGCGACGA