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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGGTTCAGTACCTCAAGAAAAAAGCAGACTCTGTTCCTCTTCCTGTTTCCATCATCGCCGAGGTTGATCTCTACAAGTTTGACCCATGGGAACTCCCAAgtatgcaacttcatcacaaaaccaccttttcttttcctcctttcatgcaaacccactttatatttttccatgactaattgcttaccttatgaacccattgaatttttggatccaatatttattttccttttggtgtttttgtgtgttttttttag

Basic information

species Glycine max
transcript GLYMA13G31660.1
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA13G31660.1 (Glycine max), 5'ss of exon 1
lower sequence: LOC_Os07g37920.1 (Oryza sativa), 5'ss of exon 1
GTGGTTCAGTACCTCAAGAAAAAAGCAGACTCTGTTCCTCTTCCTGTTTCCATCATCGCCGAGGTTGATCTCTACAAGTTTGACCCATGGGAACTCCCAAgtatgcaacttcatcacaaaaccaccttttcttttcctcctttcatgcaaacccactttatatttttccatgactaattgcttaccttatgaacccattgaatttttggatccaatatttattttccttttggtgtttttgtgtgttttttttag
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GTGGTGCACTACCTCAAGAAGAAGGCCGCCTCCGTTCCGCTCCCCGTCACCATCATCGCCGAGGTCGATCTCTACAAGTTCGATCCCTGGGATCTCCCCGgtacgtaatttaatcactta--cacccataccaatcataaattaa---gaatttattattacagcttatatatactattatcatgcatgtatattatctaaaaaa--------------------------------------------------