1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CTCCGACGCCGCTGCACTATCCTCCGTTCTCGTCGAAGCCACTTCTCACCCTTCGCTCTTCGCTTTCTCCGAGATTCTCGCTCTGCCCAATCTTCTTCAGgttcctcttttctcaccctcgacgtttcatttatttccctcctaattttttctgatttctctttcagtttgtcgctgttatttttatttaattttttgta...
species | Glycine max |
transcript | GLYMA13G25690.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTTCGCTCTTCGCTTTCTCCGAGATTCTCGCTCTGCCCAATCTTCTTCAG CTTGAAGCAACTGAGAATTCTGCTTATCTTGATATGCTTCGGTTGTTTGCAEST: gi|22524611|gb|BU083422.1|BU083422
genomic: CTTCGCTCTTCGCTTTCTCCGAGATTCTCGCTCTGCCCAATCTTCTTCAGgttcctcttt ... cttattgcagCTTGAAGCAACTGAGAATTCTGCTTATCTTGATATGCTTCGGTTGTTTGCA
EST: CTTCGCTCTTCGCTTTCTCCGAGATTCTCGCTCTGCCCAATCTTCTTCAG CTTGAAGCAACTGAGAATTCTGCTTATCTTGATATGCTTCGGTTGTTTGCAEST: gi|31561921|gb|CD487759.1|CD487759
genomic: CTTCGCTCTTCGCTTTCTCCGAGATTCTCGCTCTGCCCAATCTTCTTCAGgttcctcttt ... cttattgcagCTTGAAGCAACTGAGAATTCTGCTTATCTTGATATGCTTCGGTTGTTTGCA
EST: CTTCGCTCTTCGCTTTCTCCGAGATTCTCGCTCTGCCCAATCTTCTTCAG CTTGAAGCAACTGAGAATTCTGCTTATCTTGATATGCTTCGGTTGTTTGCAEST: gi|18848688|gb|BM567807.1|BM567807
genomic: CTTCGCTCTTCGCTTTCTCCGAGATTCTCGCTCTGCCCAATCTTCTTCAGgttcctcttt ... cttattgcagCTTGAAGCAACTGAGAATTCTGCTTATCTTGATATGCTTCGGTTGTTTGCA
EST: CTTCGCTCTTCGCTTTCTCCGAGATTCTCGCTCTGCCCAATCTTCTTCAG CTTGAAGCAACTGAGAATTCTGCTTATCTTGATATGCTTCGGTTGTTTGCAEST: gi|23053053|gb|BU577544.1|BU577544
genomic: CTTCGCTCTTCGCTTTCTCCGAGATTCTCGCTCTGCCCAATCTTCTTCAGgttcctcttt ... cttattgcagCTTGAAGCAACTGAGAATTCTGCTTATCTTGATATGCTTCGGTTGTTTGCA
EST: CTTCGCTCTTCGCTTTCTCCGAGATTCTCGCTCTGCCCAATCTTCTTCAG CTTGAAGCAACTGAGAATTCTGCTTATCTTGATATGCTTCGGTTGTTTGCAEST: gi|19053359|gb|BM732026.1|BM732026
genomic: CTTCGCTCTTCGCTTTCTCCGAGATTCTCGCTCTGCCCAATCTTCTTCAGgttcctcttt ... cttattgcagCTTGAAGCAACTGAGAATTCTGCTTATCTTGATATGCTTCGGTTGTTTGCA
EST: CTTCGCTCTTCGCTTTCTCCGAGATTCTCGCTCTGCCCAATCTTCTTCAG CTTGAAGCAACTGAGAATTCTGCTTATCTTGATATGCTTCGGTTGTTTGCAEST: gi|16346940|gb|BI972535.1|BI972535
genomic: CTTCGCTCTTCGCTTTCTCCGAGATTCTCGCTCTGCCCAATCTTCTTCAGgttcctcttt ... cttattgcagCTTGAAGCAACTGAGAATTCTGCTTATCTTGATATGCTTCGGTTGTTTGCA
EST: CTTCGCTCTTCGCTTTCTCCGAGATTCTCGCTCTGCCCAATCTTCTTCAG CTTGAAGCAACTGAGAATTCTGCTTATCTTGATATGCTTCGGTTGTTTGCA
genomic: CTTCGCTCTTCGCTTTCTCCGAGATTCTCGCTCTGCCCAATCTTCTTCAGgttcctcttt ... cttattgcagCTTGAAGCAACTGAGAATTCTGCTTATCTTGATATGCTTCGGTTGTTTGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCCGACGCCGCTGCACTATCCTCCGTTCTCGTCGAAGCCACTTCTCACCCTTCGCTCTTCGCTTTCTCCGAGATTCTCGCTCTGCCCAATCTTCTTCAGgttcctcttttctcaccctcgacgtttcatttatttccctcctaattttttctgatttctctttcagtttgtcgctgttatttttatttaattttttgta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctcaccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttccctc