1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
AGCCTAAACGCTTTGCAATCAGACCTGACAAGACCAGTGAAGTATTTGGAGCTTTGCTTCCTTTGCTCTTTCGCTTTGCTACCGGAGTTTTCGTTTCTGGgtaactatgctccctttcttcatattggtttctcttttgttttttctgttttcagttttgtcacaagcatacctaaattctaacttctaaggccttgttt...
species | Glycine max |
transcript | GLYMA13G22160.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCTTTGCTTCCTTTGCTCTTTCGCTTTGCTACCGGAGTTTTCGTTTCTGG GTATTCTTTTTCAATTGTTTCTAAGGATGAAATTCCTCCAGATGAATATGCEST: gi|208051527|gb|GD845966.1|GD845966
genomic: GCTTTGCTTCCTTTGCTCTTTCGCTTTGCTACCGGAGTTTTCGTTTCTGGgtaactatgc ... gccatggcagGTATTCTTTTTCAATTGTTTCTAAGGATGAAATTCCTCCAGATGAATATGC
EST: GCTTTGCTTCCTTTGCTCTTTCGCTTTGCTACCGGAGTTTTCGTTTCTGG GTATTCTTTTTCAATTGTTTCTAAGGATGAAAEST: gi|298198201|gb|HO039740.1|HO039740
genomic: GCTTTGCTTCCTTTGCTCTTTCGCTTTGCTACCGGAGTTTTCGTTTCTGGgtaactatgc ... gccatggcagGTATTCTTTTTCAATTGTTTCTAAGGATGAAA
EST: GCTTTGCTTCCTTTGCTCTTTCGCTTTGCTACCGGAGTTTTCGTTTCTGG GTATTCTTTTTCAATTGTTTCTAAGGATGAAATTCCTCCAGATGAATATGCEST: gi|298182803|gb|HO031538.1|HO031538
genomic: GCTTTGCTTCCTTTGCTCTTTCGCTTTGCTACCGGAGTTTTCGTTTCTGGgtaactatgc ... gccatggcagGTATTCTTTTTCAATTGTTTCTAAGGATGAAATTCCTCCAGATGAATATGC
EST: GCTTTGCTTCCTTTACTCTTTCGCTTTACTACCGGAGTTCTCGTTTCTGG GTATTCTTTTTCAATTGTTTCTAAGGATGAAATTCCTCCAGATGAATATGC
genomic: GCTTTGCTTCCTTTGCTCTTTCGCTTTGCTACCGGAGTTTTCGTTTCTGGgtaactatgc ... gccatggcagGTATTCTTTTTCAATTGTTTCTAAGGATGAAATTCCTCCAGATGAATATGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGCCTAAACGCTTTGCAATCAGACCTGACAAGACCAGTGAAGTATTTGGAGCTTTGCTTCCTTTGCTCTTTCGCTTTGCTACCGGAGTTTTCGTTTCTGGgtaactatgctccctttcttcatattggtttctcttttgttttttctgttttcagttttgtcacaagcatacctaaattctaacttctaaggccttgttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctccctt