Skip to another splice site:
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 5'  3'   		2  
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTGACCAGAGACAGAGCAGCACTCACATTCACAACGAAGGTTTCCTATTCATCAGACATGGTGAAGGCAATCAGAGTTCACGAACTCGGTGGCCCTCAAgtaagtaaatcaattcatttctcttctctttcacatactcatctttgttttactcattatttacaattgttgatcag

Basic information

species Glycine max
transcript GLYMA12G36990.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15813075|gb|BI785350.1|BI785350
EST:     CATCAGACATGGTGAAGGCAATCAGAGTTCACGAACTCGGTGGCCCTCAA                         GTTCTGAAGTGGGAGGATGTGGAAATTGGAGATCCAAAAGAAGGCGAGGTC
genomic: CATCAGACATGGTGAAGGCAATCAGAGTTCACGAACTCGGTGGCCCTCAAgtaagtaaat ... tgttgatcagGTTCTGAAGTGGGAGGATGTGGAAATTGGAGATCCAAAAGAAGGCGAGGTC
EST: gi|298177857|gb|HO027410.1|HO027410
EST:     CATCAGACATGGTGAAGGCAATCAGAGTTCACGAACTCGGTGGCCCTCAA                         GTTCTGAAGTGGGAGGATGTGGAAATTGGAGATCCAAAAGAAGGCGAGGTC
genomic: CATCAGACATGGTGAAGGCAATCAGAGTTCACGAACTCGGTGGCCCTCAAgtaagtaaat ... tgttgatcagGTTCTGAAGTGGGAGGATGTGGAAATTGGAGATCCAAAAGAAGGCGAGGTC
EST: gi|151395021|gb|EV264892.1|EV264892
EST:     CATCAGACATGGTGAAGGCAATCAGAGTTCACGAACTCGGTGGCCCTCAA                         GTTCTGAAGTGGGAGGATGTGGAAATTGGAGATCCAAAAGAAGGCGAGGTC
genomic: CATCAGACATGGTGAAGGCAATCAGAGTTCACGAACTCGGTGGCCCTCAAgtaagtaaat ... tgttgatcagGTTCTGAAGTGGGAGGATGTGGAAATTGGAGATCCAAAAGAAGGCGAGGTC
EST: gi|4313864|gb|AI460983.1|AI460983
EST:     CATCAGACATGGTGAAGGCAATCAGAGTTCACGAACTCGGTGGCCCTCAA                         GTTCTGAAGTGGGAGGATGTGGAAATTGGAGATCCAAAAGAAGGCGAGGTC
genomic: CATCAGACATGGTGAAGGCAATCAGAGTTCACGAACTCGGTGGCCCTCAAgtaagtaaat ... tgttgatcagGTTCTGAAGTGGGAGGATGTGGAAATTGGAGATCCAAAAGAAGGCGAGGTC
EST: gi|213590530|gb|DB973303.1|DB973303
EST:     CATCAGACATGGTGAAGGCAATCAGAGTTCACGAACTCGGTGGCCCTCAA                         GTTCTGAAGTGGGAGGATGTGGAAATTGGAGATCCAAAAGAAGGCGAGGTC
genomic: CATCAGACATGGTGAAGGCAATCAGAGTTCACGAACTCGGTGGCCCTCAAgtaagtaaat ... tgttgatcagGTTCTGAAGTGGGAGGATGTGGAAATTGGAGATCCAAAAGAAGGCGAGGTC
EST: gi|298195816|gb|HO044207.1|HO044207
EST:     CATCAGACATGGTGAAGGCAATCAGAGTTCACGAACTCGGTGGCCCTCAA                         GTTCTGAAGTGGGAGGATGTGGAAATTGGAGATCCAAAAGAAGGCGAGGTC
genomic: CATCAGACATGGTGAAGGCAATCAGAGTTCACGAACTCGGTGGCCCTCAAgtaagtaaat ... tgttgatcagGTTCTGAAGTGGGAGGATGTGGAAATTGGAGATCCAAAAGAAGGCGAGGTC
EST: gi|254331742|gb|GR843592.1|GR843592
EST:     CATCAGACATGGTGAAGGCAATCAGAGTTCACGAACTCGGTGGCCCTCAA                         GTTCTGAAGTGGGAGGATGTGGAAATTGGAGATCCAAAAGAAGGCGAGGTC
genomic: CATCAGACATGGTGAAGGCAATCAGAGTTCACGAACTCGGTGGCCCTCAAgtaagtaaat ... tgttgatcagGTTCTGAAGTGGGAGGATGTGGAAATTGGAGATCCAAAAGAAGGCGAGGTC
EST: gi|298191369|gb|HO038848.1|HO038848
EST:     CATCAGACATGGTGAAGGCAATCAGAGTTCACGAACTCGGCGGCCCTCAA                         GTTCTGAAGTGGGAGGATGTGGAAATTGGAGATCCAAAAGAAGGCGAGGTC
genomic: CATCAGACATGGTGAAGGCAATCAGAGTTCACGAACTCGGTGGCCCTCAAgtaagtaaat ... tgttgatcagGTTCTGAAGTGGGAGGATGTGGAAATTGGAGATCCAAAAGAAGGCGAGGTC
EST: gi|192306490|gb|FG996194.1|FG996194
EST:     CATCAGACATGGTGAAGGCAATCAGAGTTCACGAACTCGGTGGCCCTCAA                         GTTCTGAAGTGGGAGGATGTGGAAATTGGAGATCCAAAAGAAGGCGAGGTC
genomic: CATCAGACATGGTGAAGGCAATCAGAGTTCACGAACTCGGTGGCCCTCAAgtaagtaaat ... tgttgatcagGTTCTGAAGTGGGAGGATGTGGAAATTGGAGATCCAAAAGAAGGCGAGGTC
EST: gi|298175464|gb|HO015097.1|HO015097
EST:     CATCAGACATGGTGAAGGCAATCAGAGTTCACGAACTCGGTGGCCCTCAA                         GTTCTGAAGTGGGAGGATGTGGAAATTGGAGATCCAAAAGAAGGCGAGGTC
genomic: CATCAGACATGGTGAAGGCAATCAGAGTTCACGAACTCGGTGGCCCTCAAgtaagtaaat ... tgttgatcagGTTCTGAAGTGGGAGGATGTGGAAATTGGAGATCCAAAAGAAGGCGAGGTC